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SCNpilot_BF_INOC_scaffold_1868

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1868_1
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(219..947)
DNA (729bp) protein (243aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|SAAS:SAAS00055690}; EC=2.4.-.- {ECO:0000256|SAAS:SAAS00279069};; EC=2.4.2.- {ECO:0000256|SAAS:SAAS00055699};; TaxID=365046 speci
Candidate monofunctional peptidoglycan glycosyltransferase, Glycosyltransferase Family 51 n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZP1_RAMTT
monofunctional peptidoglycan glycosyltransferase
SCNpilot_BF_INOC_scaffold_1868_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1187..2083)
DNA (897bp) protein (299aa)
TonB family protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TR47_ALIDB
TonB family protein
TonB family protein {ECO:0000313|EMBL:GAO24950.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1
SCNpilot_BF_INOC_scaffold_1868_3
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2083..4146)
DNA (2064bp) protein (688aa)
Ribonuclease II n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9D9_ACIDE
Ribonuclease II {ECO:0000313|EMBL:EER58905.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
ribonuclease II
SCNpilot_BF_INOC_scaffold_1868_4
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4211..4804)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TBW9_ACIDE
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_1868_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4848..6005
DNA (1158bp) protein (386aa)
cell wall shape-determining protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036F4369
Rod shape-determining protein roda {ECO:0000313|EMBL:GAD23808.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
rod shape-determining protein RodA
SCNpilot_BF_INOC_scaffold_1868_6
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6137..6478
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI0003739A05
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE43044.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (stra
SCNpilot_BF_INOC_scaffold_1868_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6566..7726)
DNA (1161bp) protein (387aa)
extracellular ligand-binding receptor id=12552489 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
extracellular ligand-binding receptor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
extracellular ligand-binding receptor
SCNpilot_BF_INOC_scaffold_1868_8
Anoxybacillus thermarum, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7916..9181)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI00036F9DEF
Anoxybacillus thermarum strain AF/04 contig000005, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ95489.1}; TaxID=404937 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacil
metabolite transport protein
SCNpilot_BF_INOC_scaffold_1868_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9258..10769
DNA (1512bp) protein (504aa)
DNA repair protein radA n=2 Tax=Alicycliphilus denitrificans RepID=E8TTX1_ALIDB
DNA repair protein rada
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus d
SCNpilot_BF_INOC_scaffold_1868_10
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11050..11472
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000365B3C7
Uncharacterized protein {ECO:0000313|EMBL:EGI77023.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis
hypothetical protein
SCNpilot_BF_INOC_scaffold_1868_11
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11542..12474
DNA (933bp) protein (311aa)
branched-chain amino acid aminotransferase (EC:2.6.1.- 2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=GWA2_Curvibacter_64_110_curated
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HTS6_9BURK
SCNpilot_BF_INOC_scaffold_1868_12
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12491..12700
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q3K3_ACIAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX44245.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (str
SCNpilot_BF_INOC_scaffold_1868_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12745..13959)
DNA (1215bp) protein (405aa)
polymerase n=1 Tax=Variovorax paradoxus RepID=UPI00037794A2
O-antigen polymerase
O-antigen polymerase {ECO:0000313|EMBL:ACS16920.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (str
SCNpilot_BF_INOC_scaffold_1868_14
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14214..15500)
DNA (1287bp) protein (429aa)
Histidine kinase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXB7_VARPS
histidine kinase
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_1868_15
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15669..16376)
DNA (708bp) protein (236aa)
Response regulator receiver n=2 Tax=Alicycliphilus denitrificans RepID=E8TUL9_ALIDB
winged helix family two component transcriptional regulator
Response regulator receiver {ECO:0000313|EMBL:ADU98095.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus
SCNpilot_BF_INOC_scaffold_1868_16
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16846..18204)
DNA (1359bp) protein (453aa)
UPI0003D67D24 related cluster n=1 Tax=unknown RepID=UPI0003D67D24
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase {ECO:0000313|EMBL:AIY40950.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae;
SCNpilot_BF_INOC_scaffold_1868_17
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18324..19082
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000377472E
UPF0271 protein AX13_07890 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquat
Lactam utilization protein LamB
SCNpilot_BF_INOC_scaffold_1868_18
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19087..20727
DNA (1641bp) protein (547aa)
urea amidolyase-like protein (EC:6.3.4.6)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037BE4BC
Allophanate hydrolase subunit 2 {ECO:0000313|EMBL:GAD23819.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
SCNpilot_BF_INOC_scaffold_1868_19
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20775..22517
DNA (1743bp) protein (581aa)
N-6 DNA methylase n=1 Tax=Comamonas testosteroni S44 RepID=D8D6J1_COMTE
N-6 DNA methylase {ECO:0000313|EMBL:EFI61444.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;"
N-6 DNA methylase
SCNpilot_BF_INOC_scaffold_1868_20
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22514..22732
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:ADE12409.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotr
SCNpilot_BF_INOC_scaffold_1868_21
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23282..23554
DNA (273bp) protein (91aa)
Restriction modification system DNA specificity domain n=1 Tax=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) RepID=A1VAP4_DESVV
Type-1 restriction enzyme EcoKI specificity protein {ECO:0000313|EMBL:GAO33453.1}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;
restriction modification system DNA specificity subunit
Displaying 21 items

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