ggKbase home page

SCNpilot_BF_INOC_scaffold_1569_14

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 53 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 12847..13248

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 132.0
  • Bit_score: 232
  • Evalue 2.80e-58
Ribonuclease VapC n=1 Tax=Thauera phenylacetica B4P RepID=N6ZRM9_9RHOO similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 132.0
  • Bit_score: 232
  • Evalue 2.00e-58
PIN (PilT N terminus) domain similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 133.0
  • Bit_score: 211
  • Evalue 1.80e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thauera phenylacetica → Thauera → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGCTCCGCTACCTGCTGGACACCAACATCGCCATCTACGTGATCAAGCGGCGCCCGCCCGAGCTGCTGGGCGTGTTCAACCGGCACGCGGGGCAAATGGGCATCAGCGCGGTCACGCTGGCCGAATTGCTGCACGGAGCCGAAAAGAGCGAGCGCCGCGAGCACAACCTGGCGCAGGTGGAGGACTTCAGCGCGCGCCTGGCGGTGCTGGACTACACGCCCAAGGCGGCGGCGCACTATGGCGACATCCGCGCCGAGCTGGAGCGCAAGGGCACGCCGATCGGGGTCAATGACCTGCACATCGCCGGCCACGCGCGCAGCGAGGGCCTGATCCTGGTGACCAACAACGCGCGCGAGTTTCAGCGCGTGGCGGGCTTGCGGGTGGAAAACTGGGTGGCCTGA
PROTEIN sequence
Length: 134
MLRYLLDTNIAIYVIKRRPPELLGVFNRHAGQMGISAVTLAELLHGAEKSERREHNLAQVEDFSARLAVLDYTPKAAAHYGDIRAELERKGTPIGVNDLHIAGHARSEGLILVTNNAREFQRVAGLRVENWVA*