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SCNpilot_BF_INOC_scaffold_1907_12

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 53 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(12827..13981)

Top 3 Functional Annotations

Value Algorithm Source
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00035F0FAD similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 376.0
  • Bit_score: 614
  • Evalue 9.30e-173
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 376.0
  • Bit_score: 604
  • Evalue 2.10e-170
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ACS17881.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax. similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 376.0
  • Bit_score: 604
  • Evalue 1.00e-169

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1155
ATGCTCGCAAACAAGAAGGCGCTGCTTGCCGCCGCCATCACGCTCGGCTGCACGGCCGCCTGGGCCGACATCAACGTCGGCGTCACGCTGTCGGCCACCGGGCCGGCCGCCTCGCTGGGCATTCCCGAGAAGAACACCATCGCGCTGCTGCCGCAGACCATCGGTGGGCAAAAGATCAACTACATCCTGCTGGACGACGCCTCGGACACCACGCAGACGGTGACCAACACGCGCAAGCTGATCACCGAGCGCAACGTCGACGTCATCATCGGCTCCTCCACCACGCCCACCTCGCTGGCCATGATCGACGTCGTGGCCGAGGCGCAGACGCCCATGATCTCGCTGGGCGCGTCGGCCGCCATCATCGAGCCTCAGGACGCCAAGAAGCGCTGGGCCTTCAAGACGCCGCAAAACGACATCATGATGGCGCTGGCGATTGCCGAGCACATGGCGGCCAACGGCGTCAAGACGGTGGGCTTCATCGGCTTTTCCGACGCCTACGGCGAGGGCTGGTACCGGGAAACCGTCAAGGCGCTGGACCTGAAGAAGATCAAGCTGGTGGCCAACGAGCGCTTCTCGCGCACCGACACCGCGGTGACCGGCCAGGTGCTCAAGCTGATCGGCGCTAAGCCGGACGCCGTCCTGGTGGCGGGCTCGGGCACGCCGGCCGCGCTGCCGCAGAAGACGCTCAAGGAGCGGGGCTACGCCGGCAAGTACTACCAGACGCATGGCGTGGCCAACAACGACTTCCTGCGCGTGGGCGGCAAGGACGTGGAAGGCACCTTCCTGCCGGCCGGCCCGGTGCTGGTGGCCGATCAGCTGCCGGCCGCCAACCCGGTGCGCAAGTCGGCGCTGGAATACATCAGCGCCTACGAGGGCGCCAACGGCAAGGGCAGCGTGTCCACTTTCGGCGGCCACGCCTGGGACGCCGGTCAGGTGCTGAAGGCCGCGATCCCGGTGGCGCTCAAGGGCGGCCAGCCCGGCACGCCGCAGTTCCGCAATGCGCTGCGGGACGCCCTGGAAAGCGTCAAGGAAGTGCCCGGCGCGCACGGCATCTTCAACATGTCGGCTTCCGATCACCTGGGGCTGGACCAGCGTGCGCGCGTGATGGTGAAGATCGAAAACGGTCGCTGGAAGTACCAGGAAGTCAAGTAA
PROTEIN sequence
Length: 385
MLANKKALLAAAITLGCTAAWADINVGVTLSATGPAASLGIPEKNTIALLPQTIGGQKINYILLDDASDTTQTVTNTRKLITERNVDVIIGSSTTPTSLAMIDVVAEAQTPMISLGASAAIIEPQDAKKRWAFKTPQNDIMMALAIAEHMAANGVKTVGFIGFSDAYGEGWYRETVKALDLKKIKLVANERFSRTDTAVTGQVLKLIGAKPDAVLVAGSGTPAALPQKTLKERGYAGKYYQTHGVANNDFLRVGGKDVEGTFLPAGPVLVADQLPAANPVRKSALEYISAYEGANGKGSVSTFGGHAWDAGQVLKAAIPVALKGGQPGTPQFRNALRDALESVKEVPGAHGIFNMSASDHLGLDQRARVMVKIENGRWKYQEVK*