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SCNpilot_BF_INOC_scaffold_23212_4

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 53 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 3476..4309

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI0003679C1D similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 275.0
  • Bit_score: 420
  • Evalue 1.90e-114
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 274.0
  • Bit_score: 416
  • Evalue 7.60e-114
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ADU34322.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax. similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 274.0
  • Bit_score: 416
  • Evalue 3.80e-113

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGAAGGGTTCACAAGCAACGAAGCTGATGGTCGCCGCCGGGCTCGCGTCGCTGGCGCTCGGCGCATCGGCGGCCGACTCGATCAAGGTCGGTTTCATGCTGCCGTATTCCGGCACTTACACGGCGCTGGCCAACGCGATCGAGAACGGCTTCAAGCAGTACGTCGACGAGCAGGGCGGCAAGCTCGGCGGGCTGTCCGTCGAATACGTCCGCGTCGACGACGAGAGCGCCCCGGCGGAGGCCACCGACAACATCAACAAGCTGATCAACCGCGACAACGTCGACGTCGTGATCGGCACCGTGCACTCGGGCGTCGCGATGGCGATGGCCAAGGTCGCGAAAGACACCGGCACGCTGCTGATCGTGCCGAACGCCGGCGCCGACGCCGTCACCGGTCCGATGTGCGCGCCGAACATCTTCCGCAGCTCGTTCTCGAACTGGCAGCCCGCCTACGCGATGGGCGAGGTCGCTGCCAAGAAAGGCTACAAGCGCGCGGTCACCATCACCTGGGACTACGCGGCGGGCAAGGAGAGCGTCAACGGCTTCAAGGAAGCGTTCACCAAGGCCGGCGGCAAGATCGAGAAGGATCTCACGCTGCCGTTCCCGCGCGAGGAGTTCCAGGCGCTGCTCACCGAGATCGCCTCGATCAAGCCCGACGTCGTCTACACGTTCTTCGCCGGCGCGGGCGCGGTCAAGTTCGTCAAGGACTACGCGGCGGCCGGGCTGAAGGACTCGATCCCGCTGGTCGGCGCCGGCTTCCTCACCGACGGCACGCTCGTCGCGCAGGGCGAATCGGCGCAGGGCCTGCTCACCACGCTGCACTACGCCGACGGG
PROTEIN sequence
Length: 278
MKGSQATKLMVAAGLASLALGASAADSIKVGFMLPYSGTYTALANAIENGFKQYVDEQGGKLGGLSVEYVRVDDESAPAEATDNINKLINRDNVDVVIGTVHSGVAMAMAKVAKDTGTLLIVPNAGADAVTGPMCAPNIFRSSFSNWQPAYAMGEVAAKKGYKRAVTITWDYAAGKESVNGFKEAFTKAGGKIEKDLTLPFPREEFQALLTEIASIKPDVVYTFFAGAGAVKFVKDYAAAGLKDSIPLVGAGFLTDGTLVAQGESAQGLLTTLHYADG