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SCNpilot_BF_INOC_scaffold_442_84

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 53 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(79351..80046)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CW71_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 223.0
  • Bit_score: 264
  • Evalue 8.40e-68
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 223.0
  • Bit_score: 264
  • Evalue 2.40e-68
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACS16769.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 223.0
  • Bit_score: 264
  • Evalue 1.20e-67

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGCGCGCCGTGCTGTCCCGCCCTGCCCCGCTGCCGCCGGCCGCGGACGAGGCGCCGCGCCCCGACCGCAAGGCGGCCATCCTGCTGGCGGCCGAGAAGCTGTTTGCCCAGCACGGCTACCACGCGGTGTCGATCCGCCGGATCGCCGCCGAGGCCGGCGTGCCGCTGGCCCTGGTGGGCTATTACTACGGCGCCAAGCACGAGCTGTTTCACGCCATCTTCGCGCACTGGCAGGGCACCATCGACCAGCGGCTGGCGCTGCTGCGCCAGGCGCTGGCCGGCCGCCAGCCGCCGCCGCTGCGGCGCGGGGTGCAGGCCTTCGTCGAGCCGGTGCTGGCCCTGCGCGCCAGTGCCGAGGGCGAGTACTACGCCATGCTGGTGGCGCGCGAGCTGGTCTACCGCACGCCCGACACCGACCGCGTGCTGGCCGAGATGTTCGACCCCATGGCACACGCCTTCATCGACGCGCTACACCAGCTGCGCCCGCGCTGGCCGCGCGCGCGCGCCGCCTGGGCCTACCAGTTCGCCATGGGCGCGCTGCTGCACCACCTGGTGGACCACCGCGTGCAGCGCCTGTCGCATGGCCAGAACGCGCCCCACGACGCGGCCGCCGCGCCGCTGCTGATCGATTTCATCACCGCCGGCATCGACGCCGTGCTGCCCGCCGCTTTCACCCCTTCGACACAGGAGACCTGA
PROTEIN sequence
Length: 232
MRAVLSRPAPLPPAADEAPRPDRKAAILLAAEKLFAQHGYHAVSIRRIAAEAGVPLALVGYYYGAKHELFHAIFAHWQGTIDQRLALLRQALAGRQPPPLRRGVQAFVEPVLALRASAEGEYYAMLVARELVYRTPDTDRVLAEMFDPMAHAFIDALHQLRPRWPRARAAWAYQFAMGALLHHLVDHRVQRLSHGQNAPHDAAAAPLLIDFITAGIDAVLPAAFTPSTQET*