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SCNpilot_BF_INOC_scaffold_442_137

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 53 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(137215..137928)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=31 Tax=Bordetella RepID=F4LCM9_BORPC similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 228.0
  • Bit_score: 314
  • Evalue 1.20e-82
ECF-family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 228.0
  • Bit_score: 314
  • Evalue 3.50e-83
Putative ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CCJ62441.1}; TaxID=568706 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 228.0
  • Bit_score: 314
  • Evalue 1.70e-82

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Taxonomy

Bordetella pertussis → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGCCGAACACCCTGCCCCTGGCACACGCGCCAAGCGCCCAGCACACCACCGACACCGAGCTGGCGGCGCGCGCCGCGCGCGGCGAGCAAGCCGCCTTCGAGGCCATCATGCGTCGCCACAACCGCCTGCTGTTTCGCACGGCGCGCAGCATTCTGAAGAACGACGCCGACGCCGAGGACGCCCTGCAGGACGCCTATCTGCGCGCCTGGCGGGCACTGGACAGCTTCCGGGCCGACGCCAAGCTGTCCACCTGGCTGGTGCGCATCGTCGCCAACGAGGCGCTGGGCCGGCTGCGCCGCCATCAGGCCACCCTCATTCCTCTGGACGCCGCCATGAACGCCACCGAACCCGAAATCCAGGCCTCGCTGACCGACACGCCGGACAAGCGTCCCGAGCAGTTCGCCATGCGCGCGCAGATGCGCCAGCTGCTGGAAGCGCGCATCGACCTGCTGCCGGAAGTGTTCCGCACCGTGTTCATGCTGCGCGCGGTCGAGGAAATGAGCGTGGAGGAGGTGTCGGAGGCGCTGGGGATTCCCGAGGCCACCGTGCGCACGCGCTTCTTCCGTGCCCGCGGCCTGCTGCGCGAGGACCTGGCCAGCCAGGCCGATATCGCGCTGGGCGACGCTTTCGCCTTCGACGGCGCGCGCTGCGACCGCATCGTGGCTGGCGTGCTGGCCCGCGGCGGCGCCGAGGGCCTGTCGCGCAAGCCGTAG
PROTEIN sequence
Length: 238
MPNTLPLAHAPSAQHTTDTELAARAARGEQAAFEAIMRRHNRLLFRTARSILKNDADAEDALQDAYLRAWRALDSFRADAKLSTWLVRIVANEALGRLRRHQATLIPLDAAMNATEPEIQASLTDTPDKRPEQFAMRAQMRQLLEARIDLLPEVFRTVFMLRAVEEMSVEEVSEALGIPEATVRTRFFRARGLLREDLASQADIALGDAFAFDGARCDRIVAGVLARGGAEGLSRKP*