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SCNpilot_BF_INOC_scaffold_442_164

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 53 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(162816..164381)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-54 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036D1622 similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 525.0
  • Bit_score: 664
  • Evalue 1.10e-187
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax s similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 525.0
  • Bit_score: 662
  • Evalue 4.40e-187
RNA polymerase sigma-54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 531.0
  • Bit_score: 652
  • Evalue 9.10e-185

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Taxonomy

Acidovorax sp. MR-S7 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1566
GTGAAACCCGGGCTTTCGCTTCGCGTTTCGCAGCAGCTGGCGCTGACGCCGCAGCTGCAGCAATCCATCCGGCTGTTGCAGCTGTCCACGCTGGAGCTGGCCGGAGAGGTGGAGCAGATGCTGGCCGACAACCCGTTTCTGGAGCGCGAGGACGAGGCCGCGCCACGCGAGGAGTTCGGGCTGGCGCAGGCCGACGCCCGCGTCAGCGCGGGCGACCGTGCCGATGAAAATGCTATTGATTCAGGAGCTGCTGGCGCTGATCCGGCGGGCGCAGATGGCGATTTTGAGCCCGAATCCCTGGCGCCGGACGACTGGGACGGCGACGGCAGCGCGGACATCGCTCCGGACGACGGCGAATGGGGTGGCGAGGCGCCGGCGCGCACCGGCAGCCCGGACGGGGACGAGACCGACCCGGGCGAGCGCGCCGGTGGCCAGCCATCGCTGGCCGAGCACCTGCTGCACCAGGCGCTGACGCTGCGCCTGTCACCCGAGGACGCGGCGGCGCTGCGCTTTCTGATCGGCTCGCTCAACGACGACGGCTACCTGGAGGATTCGCTGGCGCAGCTGGCGGCCACGCTGACCGACACGGACGACGAGCTGGAGCAGATGCAGGAGCTGGTGCACCGCCTGACGCTGGCGCTCAGGCTGCTGCAGTCGCTGGAGCCGGCCGGCGTGGGCGCGCGCCACCTGGCCGAATGCCTGACGCTGCAACTCAAGAGCCGCCAGGCCGAGCGCGCGCTGCCGCCGCCCGAGCAGGCGCGCATCGCCACCGCGCTGCGCATCTGCGCGCGGCACGACGCCGTCGAGCTGCTGGCGCGGCGCGACATCCGCAAGCTGGCGCAGCTCGTCGGCGAGAGCGAGGACGCGGTGCGCGCCGCCACGGCGCTGATCGGCCGGCTCGACCCCAAGCCGGGGCGCCGCTTTGTCGACGTCGAGCGCCAGGTGATCGTGCCCGACGTCATCGTCAGCGCCGTCGGCGGCGCCGCGCAGCCGCGCTTTCGCGTGGCGCTCAACCCCGAGGTCATGCCCCGGCTGCGCGTGCACGAGCTGTACGCCAGCGCCCTGCGCGGCAGCGACAGGCACCCGGCGCTGGCCGAGCGCCTGCAGGAGGCGCGCTGGTTCATCCGCAACATCCAGCAGCGCTTCGACACCATCCTGCGCGTGGCCAGCGCCATCGTCGAGCGCCAGCGCGGCTTCTTCCTGCACGGCGAGCTGGCCATGCGGCCGATGATCCAGCGCGAGCTGGCCGACGAGCTGGGCGTGCACGAGTCCACCATCTCGCGCGTCACCACCGCCAAGTACATGGCCACGCCGCGCGGCACTTTCGAGCTGAAGTACTTCTTCGGCTCGGCGCTGGGCACCGAATCGGGCACCAGCGCCAGCAGCACGGCGGTGCGCGCGCTCATCAAGCAGTTCATCGAGGCCGAGGACGCCGCGCGCCCCCTGTCGGACGCCGGCATCGCCGAGCTGCTGAAGGCGCAGGGCATCGACTGCGCGCGCCGCACCGTGGCCAAATACCGCGAGGCGCTGCGAATTCCCACCGCGCAACTGCGCAAGGGCGCCTGA
PROTEIN sequence
Length: 522
VKPGLSLRVSQQLALTPQLQQSIRLLQLSTLELAGEVEQMLADNPFLEREDEAAPREEFGLAQADARVSAGDRADENAIDSGAAGADPAGADGDFEPESLAPDDWDGDGSADIAPDDGEWGGEAPARTGSPDGDETDPGERAGGQPSLAEHLLHQALTLRLSPEDAAALRFLIGSLNDDGYLEDSLAQLAATLTDTDDELEQMQELVHRLTLALRLLQSLEPAGVGARHLAECLTLQLKSRQAERALPPPEQARIATALRICARHDAVELLARRDIRKLAQLVGESEDAVRAATALIGRLDPKPGRRFVDVERQVIVPDVIVSAVGGAAQPRFRVALNPEVMPRLRVHELYASALRGSDRHPALAERLQEARWFIRNIQQRFDTILRVASAIVERQRGFFLHGELAMRPMIQRELADELGVHESTISRVTTAKYMATPRGTFELKYFFGSALGTESGTSASSTAVRALIKQFIEAEDAARPLSDAGIAELLKAQGIDCARRTVAKYREALRIPTAQLRKGA*