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SCNpilot_BF_INOC_scaffold_1473

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1473_1
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..136
DNA (135bp) protein (45aa)
Hydrogenase, Fe-only n=2 Tax=Desulfitobacterium hafniense RepID=G9XQZ1_DESHA
hydrogenase, Fe-only
Hydrogenase, Fe-only {ECO:0000313|EMBL:ACL20074.1}; TaxID=272564 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (s
SCNpilot_BF_INOC_scaffold_1473_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

271..633
DNA (363bp) protein (121aa)
Transcriptional regulator, BlaI/MecI/CopY family n=7 Tax=Clostridium difficile RepID=G6B2G9_CLODI
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:EHJ34822.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source
penicillin-binding protein repressor
SCNpilot_BF_INOC_scaffold_1473_3
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

638..2407
DNA (1770bp) protein (590aa)
Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7D7J8_9FIRM
Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component {ECO:0000313|EMBL:CDD86599.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridial
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
SCNpilot_BF_INOC_scaffold_1473_4
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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2741..4072
DNA (1332bp) protein (444aa)
FAD dependent oxidoreductase Tax=GWF2_Lentisphaerae_49_21_curated
Glucose-inhibited division protein A id=2852342 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
tat (twin-arginine translocation) pathway signal sequence rbh
SCNpilot_BF_INOC_scaffold_1473_5
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4327..7194
DNA (2868bp) protein (956aa)
Metallophosphoesterase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MTG1_CORCM
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACV76712.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartit
SCNpilot_BF_INOC_scaffold_1473_6
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7282..8112)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Bacillus isronensis B3W22 RepID=K1KP32_9BACI
Uncharacterized protein {ECO:0000313|EMBL:EZX23478.1}; TaxID=1413510 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus C0673.;"
SCNpilot_BF_INOC_scaffold_1473_7
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8136..9953
DNA (1818bp) protein (606aa)
Uncharacterized protein n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A5R5_DESDJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL99299.1}; Flags: Precursor;; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfito
SCNpilot_BF_INOC_scaffold_1473_8
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10131..10349)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4DB44_DESAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM43018.1}; TaxID=646529 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus acidiphilus
SCNpilot_BF_INOC_scaffold_1473_9
Dehalobacter sp. UNSWDHB, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10346..11452)
DNA (1107bp) protein (369aa)
Spore germination protein (Amino acid permease) n=3 Tax=Dehalobacter RepID=K4KYN0_9FIRM
gerKB; spore germination protein (amino acid permease)
Uncharacterized protein {ECO:0000313|EMBL:EQB22144.1}; TaxID=1339256 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. UNSWDHB.;"
SCNpilot_BF_INOC_scaffold_1473_10
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11482..12651)
DNA (1170bp) protein (390aa)
Germination protein, Ger(X)C family n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W8F7_DESOD
germination protein, Ger(X)C family
Germination protein, Ger(X)C family {ECO:0000313|EMBL:AET67097.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus
SCNpilot_BF_INOC_scaffold_1473_11
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12793..14148)
DNA (1356bp) protein (452aa)
Spore germination protein GerKA n=3 Tax=Dehalobacter RepID=K4KW68_9FIRM
gerKA; Spore germination protein GerKA
Spore germination protein GerKA {ECO:0000313|EMBL:AFV06278.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
SCNpilot_BF_INOC_scaffold_1473_12
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14850..16874)
DNA (2025bp) protein (675aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI000318AF56
Sensory box protein {ECO:0000313|EMBL:EGW38633.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
SCNpilot_BF_INOC_scaffold_1473_13
GWD2_Clostridiales_32_19_curated, Clostridiales, Bacteria

Not on your lists

17054..17668
DNA (615bp) protein (205aa)
Allergen V5/Tpx-1 family protein n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XIM2_CALS8
spore coat assembly protein SafA/uncharacterized protein, YkwD family Tax=GWD2_Clostridiales_32_19_curated
allergen V5/Tpx-1 family protein
SCNpilot_BF_INOC_scaffold_1473_14
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

17817..18446
DNA (630bp) protein (210aa)
Putative uncharacterized protein id=3761200 bin=GWF2_Clostridiales_36_10 species=Clostridium sp. DL-VIII genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
hypothetical protein Tax=GWF2_Clostridiales_36_10_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1473_15
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

18406..18690
DNA (285bp) protein (95aa)
Putative uncharacterized protein id=3761200 bin=GWF2_Clostridiales_36_10 species=Clostridium sp. DL-VIII genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
hypothetical protein Tax=GWF2_Clostridiales_36_10_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1473_16
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

18691..19755
DNA (1065bp) protein (355aa)
Putative uncharacterized protein id=3761203 bin=GWF2_Clostridiales_36_10 species=Clostridium sp. DL-VIII genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
hypothetical protein Tax=GWF2_Clostridiales_36_10_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1473_17
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

19756..20721
DNA (966bp) protein (322aa)
CoA-substrate-specific enzyme activase id=3761205 bin=GWF2_Clostridiales_36_10 species=Clostridium sp. DL-VIII genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
CoA-substrate-specific enzyme activase Tax=GWF2_Clostridiales_36_10_curated
CoA-substrate-specific enzyme activase
SCNpilot_BF_INOC_scaffold_1473_18
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20844..21713)
DNA (870bp) protein (290aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B4B7_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERI72994.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE
DNA-binding domain-containing protein
SCNpilot_BF_INOC_scaffold_1473_19
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21902..23308
DNA (1407bp) protein (469aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Streptococcus parasanguinis F0405 RepID=E3CF75_STRPA
Fibronectin type III domain protein {ECO:0000313|EMBL:ADW13129.1}; Flags: Precursor;; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter
carbohydrate binding family 6
SCNpilot_BF_INOC_scaffold_1473_20
unknown

Not on your lists

23305..23892
DNA (588bp) protein (196aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1473_21
unknown

Not on your lists

23963..24382
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1473_22
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24451..25011)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I4H1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETA81125.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
redoxin domain protein
SCNpilot_BF_INOC_scaffold_1473_23
unknown

Not on your lists

25235..25420
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1473_24
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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25818..26147
DNA (330bp) protein (110aa)
Rhodanese domain protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U9R8_ETHHY
Rhodanese domain-containing protein
Rhodanese domain protein {ECO:0000313|EMBL:ADU26184.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (str
SCNpilot_BF_INOC_scaffold_1473_25
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26199..27035)
DNA (837bp) protein (279aa)
Putative chemotaxis protein MotB n=1 Tax=Clostridium sp. MSTE9 RepID=J0WX39_9CLOT
Putative chemotaxis protein MotB {ECO:0000313|EMBL:EJF40891.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
putative OmpA/MotB proton channel
SCNpilot_BF_INOC_scaffold_1473_26
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

comp(27078..27920)
DNA (843bp) protein (281aa)
MotA/TolQ/ExbB proton channel id=2752834 bin=GWF2_Clostridiales_36_10 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
MotA/TolQ/ExbB proton channel; K02556 chemotaxis protein MotA Tax=GWF2_Clostridiales_36_10_curated
flagellar motor component
SCNpilot_BF_INOC_scaffold_1473_27
unknown

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comp(27934..28440)
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1473_28
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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comp(28437..28841)
DNA (405bp) protein (135aa)
Flagellar protein FliS id=2752836 bin=GWF2_Clostridiales_36_10 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
flagellar biosynthetic protein FliS Tax=GWF2_Clostridiales_36_10_curated
flagellar protein FliS
SCNpilot_BF_INOC_scaffold_1473_29
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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comp(28863..29933)
DNA (1071bp) protein (357aa)
Flagellar hook-associated protein 2 id=2672935 bin=GWF2_Clostridiales_38_85 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
fliD; flagellar capping protein FliD; K02407 flagellar hook-associated protein 2 Tax=GWF2_Clostridiales_38_85_curated
flagellar hook-associated 2 domain-containing protein
Displaying 29 items

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