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SCNpilot_BF_INOC_scaffold_3245

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3245_1
GWC1_WS6_36_11, WS6, Bacteria

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3..188
DNA (186bp) protein (62aa)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Clostridium sp. BNL1100 RepID=H2JE02_9CLOT
tRNA-specific 2-thiouridylase MnmA {ECO:0000313|EMBL:KKP91549.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_36_11.;"
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase
SCNpilot_BF_INOC_scaffold_3245_2
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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240..719
DNA (480bp) protein (160aa)
HD family phosphohydrolase n=1 Tax=Clostridium beijerinckii RepID=UPI0002E985E1
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AJG99779.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Cl
HD-GYP domain-containing protein
SCNpilot_BF_INOC_scaffold_3245_3
Paenibacillus sp. JCM 10914, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(892..3579)
DNA (2688bp) protein (896aa)
Uncharacterized protein n=1 Tax=Paenibacillus sp. JCM 10914 RepID=V9GFJ5_9BACL
Uncharacterized protein {ECO:0000313|EMBL:GAE08706.1}; TaxID=1236974 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. JCM 10914.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_3245_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4165..4494)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0002EFA634
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEI04451.1}; TaxID=1443117 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum D str. 16868
SCNpilot_BF_INOC_scaffold_3245_5
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

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comp(4611..6143)
DNA (1533bp) protein (511aa)
id=2965319 bin=GWF2_Syntrophobacterales_56_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
SCNpilot_BF_INOC_scaffold_3245_6
Paenibacillus sp. FSL H8-237, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6290..6916)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI000381B7BF
G-D-S-L family lipolytic protein {ECO:0000313|EMBL:ETT49226.1}; TaxID=1227350 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H8-23
GDSL family lipase
SCNpilot_BF_INOC_scaffold_3245_7
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6938..7174)
DNA (237bp) protein (79aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:
Glutamine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IUL6_9FIRM
glutaminyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_3245_8
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7123..8547)
DNA (1425bp) protein (475aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IUL6_9FIRM
SCNpilot_BF_INOC_scaffold_3245_9
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8550..8870)
DNA (321bp) protein (107aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262882 species="Bacteria; F
Glutamate--tRNA ligase n=2 Tax=root RepID=R5MF11_9FIRM
glutamyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_3245_10
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9227..10189)
DNA (963bp) protein (321aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262959 species="Bacteria; F
glutamyl-tRNA synthetase, bacterial family (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5YRH7_9FIRM
SCNpilot_BF_INOC_scaffold_3245_11
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10304..10843)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RGH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC33537.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
hypothetical protein
SCNpilot_BF_INOC_scaffold_3245_12
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

10987..11928
DNA (942bp) protein (314aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bact
tRNA-dihydrouridine synthase n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BCI1_9FIRM
nifR3 family TIM-barrel protein
SCNpilot_BF_INOC_scaffold_3245_13
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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comp(12038..13687)
DNA (1650bp) protein (550aa)
Histidine kinase id=3085943 bin=GWF2_Clostridiales_36_10 species=Clostridium sp. Maddingley MBC34-26 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
histidine kinase Tax=GWF2_Clostridiales_36_10_curated
histidine kinase
SCNpilot_BF_INOC_scaffold_3245_14
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

comp(13778..15394)
DNA (1617bp) protein (539aa)
Histidine kinase id=3085943 bin=GWF2_Clostridiales_36_10 species=Clostridium sp. Maddingley MBC34-26 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
histidine kinase Tax=GWF2_Clostridiales_36_10_curated
integral membrane sensor signal transduction histidine kinase
Displaying 14 items

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