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SCNpilot_BF_INOC_scaffold_10013_2

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 506..1192

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KJT6_CLOPH similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 228.0
  • Bit_score: 378
  • Evalue 3.90e-102
Transcriptional regulator {ECO:0000313|EMBL:KEZ90444.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 228.0
  • Bit_score: 388
  • Evalue 6.90e-105
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 228.0
  • Bit_score: 378
  • Evalue 1.10e-102
  • rbh

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Taxonomy

[Clostridium] celerecrescens → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 687
ATGGCAAAGATTCTTATATGTGATGATGAAGCAGGGCTCAGAGCGGTCATAAAAAGATATGCTACCTTCGAAGGACACGAGGTCACCGAAGCTGGTGATGGTATGGAGGCTGTTGAGCTTTGCAGAAATGTAAGCTTTGATATAATTATTATGGATATAATGATGCCTGAGCTTGACGGGTTTTCAGCAGTAAAGGAAATCCGTAAAGTGTCGGATACACCGGTAATAATGCTGTCGGCAAGAGGCGAAGAATATGACAAGGTTCTGGGTTTCGAAATGGGAATTGACGATTATGTGGTGAAGCCATTTTCATCCAAGGAAGTGATGCTTAGGATCAATGCAATTTTGCGTCGTACTGCCAGGGGTGATTCATCGGTCGAGAATAGTGACGGTCATATTGTTTTTAAAAAGGAAGGGCTCATTGCGGATATAACCGCTTACAGGGTGCTTATTGACGGTAGGCAGGCAGACATGGCTCCAAAGGAATATGATTTGTTGTTTTTCCTGATACGAAATAAAAATATTGCGGTTCCGAGAGAAAAAATATTGACGGAAGTATGGGGTTACGATTATTACGGAGATGACAGAACCCTTGATACGCATATGAAGCTTTTGCGAAAATCCCTCGGTCCATACGCGCATTTTATAACTACCATAAGAGGATTGGGGTATAGATTCGATGGATAA
PROTEIN sequence
Length: 229
MAKILICDDEAGLRAVIKRYATFEGHEVTEAGDGMEAVELCRNVSFDIIIMDIMMPELDGFSAVKEIRKVSDTPVIMLSARGEEYDKVLGFEMGIDDYVVKPFSSKEVMLRINAILRRTARGDSSVENSDGHIVFKKEGLIADITAYRVLIDGRQADMAPKEYDLLFFLIRNKNIAVPREKILTEVWGYDYYGDDRTLDTHMKLLRKSLGPYAHFITTIRGLGYRFDG*