ggKbase home page

SCNpilot_BF_INOC_scaffold_10530_4

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 2031..2519

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, solute-binding protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B623_RUMGN similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 159.0
  • Bit_score: 208
  • Evalue 3.80e-51
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDN76575.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus AT similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 159.0
  • Bit_score: 208
  • Evalue 5.40e-51
LacI family transcription regulator similarity KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 158.0
  • Bit_score: 109
  • Evalue 1.20e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Ruminococcus] gnavus → Blautia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 489
ATGTCGACCATTAAGGATGTTGCTTCCCACGCAGGCGTCTCCATTGCAACCGTCTCAAACTATATGAATCACACCAAACCGGTCAGCAAAGCGGTTTCCGCCCGCATTAAGGCGGCGATTGAAGAGCTGCAATATTCCCAGAATTTGACCGCGAAAAATCTGAAGAGCAACACCTATAATGACATCGGCATCATATTGCCCAACTTTAACGACCCGTATTATGTTCAGATTTTTCAGGGGATTGAATACGCGTTTCAAAACAGCTCTTACTATTTAAACCTTACGTTTTCTTATGATATACCGGAGATTGAACAGCAGATTGTACAGAACATGCTCCGGAAACAGGTTTGCGGGCTTATTCTCGTCTCCTGTCAGCCAAACGGCTGGAAGTTTTACTATGAAAACTTTAACAAGCAAAACCGCCCGATCGTTTTAATCGATCGATTGATCAACAGTCTCGATGCAAACTTTGTAGCATCCGCGAAATGA
PROTEIN sequence
Length: 163
MSTIKDVASHAGVSIATVSNYMNHTKPVSKAVSARIKAAIEELQYSQNLTAKNLKSNTYNDIGIILPNFNDPYYVQIFQGIEYAFQNSSYYLNLTFSYDIPEIEQQIVQNMLRKQVCGLILVSCQPNGWKFYYENFNKQNRPIVLIDRLINSLDANFVASAK*