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SCNpilot_BF_INOC_scaffold_1165_28

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 27937..28998

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Clostridium intestinale URNW RepID=U2PRR5_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 350.0
  • Bit_score: 390
  • Evalue 1.50e-105
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:ERK29130.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 350.0
  • Bit_score: 390
  • Evalue 2.20e-105
spermidine/putrescine ABC transporter permease/spermidine/putrescine-binding protein similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 354.0
  • Bit_score: 333
  • Evalue 6.30e-89

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Taxonomy

Clostridium intestinale → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1062
ATGAAAAAAACGATAAAACTAATGTGCTTATTGCTGGTCTTTGTGATGACCATAACACTGTTCAGCGGCTGCGGAAAAAGTGAAGAAACGAAAACAGAAGGAGTTCTGAACTTTTTCAACTGGACGGAATACATGCCGGAATCGGTGTTAACAGCCTTTGAAAAGGAATATAAAATCAAGGTGAATTATACCACCTATTCCTCTAATGAAGAAATGCTGAACAAAATAAAAACAGGTGAAAAGGGCATGTATGACCTGACCATAGCCAGCGATTACATGGTGGATACCATGCGTACAACAGGGCTTCTTGAAAAGTTCGACAATACCGTGGTCACCAACATTGGAAACATAGACCCCCAGTACACGAAAATGTATTTCGATGAAACGGGTGAATATGCGGTTCCTTATATGATTTCCAATGCAATTTTATGTTACAATAAAGCAAAGATCCCCGGCGGGATCAAATCCATCAACGATATTTTTGACAGCAAATACAAAAATTCTATCGTGATGCTGGACGATATCAGAATGGTGATGGGTCTTTCGGCACTGTCCCTGGGTTATTCCGTCAACGAAACCGACCCGGCCAAGGTTGCCAAAATGAAGGATAAACTGGTATCCTTAAAACCAAACATCAAGCTGTTTGACAGCGATTCTCCCAAAACCTCCATGATCAGCGGCGAAACCTCCATCGGCTTTATGTGGTGCGCCGAGGTTGCCCTTGCCATGGCGGAAAACCCAGACATCGTTCCCGTCTATCCCGAAGAAGGCATTTCTCTCATGATTGATAACTTTGTGATTCCGGCAGGGGCAAAGAACAAGAAAAACGCAGAGTTGTTTATTAACTTCATTTTGCGTCCTGAAATCAGCAAAATGGTATCGGCAGAATATCCCTACGTCAACCCCAACAAGGCTGCCTATGACATATTACCCGATTCTTATAAAAACAACCCCGCCAGCAACCCGCCGGCAGAAGCCCTGAAAAAAGGTCAGCTTGTCAAGAATCTGGGCGACAATGCAAAGCTGTATGACGACGTCTGGACAGAATTCAAAAACAGCTGA
PROTEIN sequence
Length: 354
MKKTIKLMCLLLVFVMTITLFSGCGKSEETKTEGVLNFFNWTEYMPESVLTAFEKEYKIKVNYTTYSSNEEMLNKIKTGEKGMYDLTIASDYMVDTMRTTGLLEKFDNTVVTNIGNIDPQYTKMYFDETGEYAVPYMISNAILCYNKAKIPGGIKSINDIFDSKYKNSIVMLDDIRMVMGLSALSLGYSVNETDPAKVAKMKDKLVSLKPNIKLFDSDSPKTSMISGETSIGFMWCAEVALAMAENPDIVPVYPEEGISLMIDNFVIPAGAKNKKNAELFINFILRPEISKMVSAEYPYVNPNKAAYDILPDSYKNNPASNPPAEALKKGQLVKNLGDNAKLYDDVWTEFKNS*