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SCNpilot_BF_INOC_scaffold_1202_10

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 9288..10628

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein RfbH n=1 Tax=Clostridium sp. CAG:632 RepID=R5KE29_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 445.0
  • Bit_score: 751
  • Evalue 5.70e-214
Lipopolysaccharide biosynthesis protein RfbH {ECO:0000313|EMBL:CCY59202.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.; similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 445.0
  • Bit_score: 751
  • Evalue 8.00e-214
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 446.0
  • Bit_score: 734
  • Evalue 2.00e-209

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Taxonomy

Clostridium sp. CAG:632 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1341
ATGTTTGATAATATGCCTGAGGAAAAGGCCAAGGAATATATTCTTCAAGTCGTGAAGGAATACAGCAATACTTATCATCAAACGAATAAACCATTTCAAGAGGGTCAGCGTATTCCCTACGCTTCGCGTGTTTATGACCACGAAGAGATTGTTAATCTGGTTGACAGCTCTTTGGAATTTTGGCTGACATCCGGCAGATATACCGACCAGTTTGAAGATGAATTTGCAAAATATCTACAGATTAAATATTGCTCCCTTGTAAATTCCGGATCTTCCGCTAATTTACTGGCGTTTATGGCGCTGACATCTCCCTTGCTGAAAGAAAGAAGAATTGACCGCGGGGACGAAATTATAACCGTAGCATGCGGATTTCCTACCACGGTAGCACCTATCATTCAATATGGTGCGGTTCCTGTTTTTGTTGACATCACCATACCTCAAGACAATATTGACGTAACGAAGCTGGAAGCAGCATTATCGGAAAAGACCAAATGTGTCATGATAGCCCATACGTTAGGGAACCCTTTTGATTTGAAGATGGTAAAAGAATTTTGTGACAAACACAATCTTTGGCTCATTGAAGACAATTGTGATGCACTCGGTTCACGCTATACCATAAACGGGGAAACAAAGTTCACCGGCTCGGTGGGTGATATCGGTACCTCAAGCTTTTATCCGCCGCATCATATGACCATGGGCGAAGGCGGTGCAGTTTATACCAACAATCCTCTGCTAAACAAAATTGTCCGTTCCATACGCGACTGGGGACGTGACTGTGTCTGTCCGTCAGGCAGGGACAATCTTTGCGGACATCGTTTTGATAAACAATACGGAGAGCTTCCGATGCATTATGACCACAAATATGTATATTCCCATTTCGGATACAATTTAAAAGCAACGGATATGCAGGCTGCTATCGGTTGTGCACAGCTTAAGAAATTCCCTTCCTTCGTTGAACGCAGAATATATAATTTTAACCGCCTGAAGTCCGCACTCACTGAAATAGCCGACAAAGTTATCTTGCCGGAAGCCTGCGAAAATTCACAACCCAGCTGGTTCGGGTTCCTGATTACCTGCCGTGAGGGAACAGACCGCAATGCAGTGGTCCAATCTATTGAAAAAAGCGGCGTGCAAACCAGAATGCTCTTTGCCGGTAATCTTGTTAAGCACCCTTGTTTTGATGAAATGCGGAAAACCGGGACGGGGTATCGGATTTCAGGAGCGCTTACAAATACGGATATCGTAATGAATCAAACATTTTGGGTAGGCGTTTATCCCGGTATGACGGATGACCATATTGATTATATGGCGAAAACGATTATAAAAGCGGTGAGGCAGTGA
PROTEIN sequence
Length: 447
MFDNMPEEKAKEYILQVVKEYSNTYHQTNKPFQEGQRIPYASRVYDHEEIVNLVDSSLEFWLTSGRYTDQFEDEFAKYLQIKYCSLVNSGSSANLLAFMALTSPLLKERRIDRGDEIITVACGFPTTVAPIIQYGAVPVFVDITIPQDNIDVTKLEAALSEKTKCVMIAHTLGNPFDLKMVKEFCDKHNLWLIEDNCDALGSRYTINGETKFTGSVGDIGTSSFYPPHHMTMGEGGAVYTNNPLLNKIVRSIRDWGRDCVCPSGRDNLCGHRFDKQYGELPMHYDHKYVYSHFGYNLKATDMQAAIGCAQLKKFPSFVERRIYNFNRLKSALTEIADKVILPEACENSQPSWFGFLITCREGTDRNAVVQSIEKSGVQTRMLFAGNLVKHPCFDEMRKTGTGYRISGALTNTDIVMNQTFWVGVYPGMTDDHIDYMAKTIIKAVRQ*