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SCNpilot_BF_INOC_scaffold_12377_1

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 2..622

Top 3 Functional Annotations

Value Algorithm Source
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3) similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 204.0
  • Bit_score: 343
  • Evalue 3.60e-92
Elongation factor Tu n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5YCH3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 204.0
  • Bit_score: 346
  • Evalue 1.50e-92
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostrid similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 204.0
  • Bit_score: 346
  • Evalue 2.10e-92

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Taxonomy

Ruminococcus sp. CAG:488 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 621
GTTGCGTTAATGGATAAGGTTGACGAATATATCCCAACTCCTGACAGAAAAGCAGACCTTCCTTTCTTAATGCCTGTTGAGGACGTATTCTCTATCACTGGTAGAGGTACTGTTGCGACCGGTAGAGTAGAAAGAGGACAAATCAGAGTTTCTGAAGAAGTTGAATTGGTAGGTCTTACCGATGCTGCAAGAAAAACTGTTGTTACCGGTATCGAAATGTTCAGAAAGCTTCTTGACTATGCTGAATCAGGCGATAACGTTGGTATCTTGCTGCGTGGTATCCAAAGAACTGAAATCCAAAGAGGTCAGGTTCTTGCAAAACCAGGCTCTATCAAACCGCATAAAAACTTCTCCGCTCAGGTTTTGGTATTGACCAAAGAAGAAGGCGGAAGACACACACCTTTCTTTAACAACTACAGACCGCAATTCTATTTCAGAACAACTGACGTAACCGGTCAAATCAAATTACCGGACGGCGTAGAAATGTGTATGCCTGGCGATAACGTTACCATGGAAGTTGAACTGATCAATTCGATCGCGATCGAACCGGGTATCAGATTCTCTATCCGTGAAGGCGGAAGAACTGTTGGTTCAGGCGTTGTTGCTGCGATCACAGAATAA
PROTEIN sequence
Length: 207
VALMDKVDEYIPTPDRKADLPFLMPVEDVFSITGRGTVATGRVERGQIRVSEEVELVGLTDAARKTVVTGIEMFRKLLDYAESGDNVGILLRGIQRTEIQRGQVLAKPGSIKPHKNFSAQVLVLTKEEGGRHTPFFNNYRPQFYFRTTDVTGQIKLPDGVEMCMPGDNVTMEVELINSIAIEPGIRFSIREGGRTVGSGVVAAITE*