ggKbase home page

SCNpilot_BF_INOC_scaffold_1460_12

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(9654..10334)

Top 3 Functional Annotations

Value Algorithm Source
cAMP-binding protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LWP2_CLOCD similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 216.0
  • Bit_score: 195
  • Evalue 8.00e-47
Crp/Fnr family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 219.0
  • Bit_score: 214
  • Evalue 3.60e-53
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:CDZ24543.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 219.0
  • Bit_score: 214
  • Evalue 1.80e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] cellulosi → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 681
ATGGAATATATGGACAAGCTATCGCAGGTGAAATTATTCAAAGGACTTTCCCCAGCGGATATAGAAACGGTTTTTCACTGTCTGCAGGCAAAACGTATGTCCTATAAAAAAGGAAATATCATAACTCATGCCGGTGATGAAATCAGAACAATCGGGATCGTGGTAAAGGGCAAGGTGGAGGTTTCAAAGGTCAATATATCCGGCAGAAAAACAATTTTGACGTTGATTGACACGGGGGAGCTGTTTGGCGAAATCATATCCTTTGCTAATATCAAAAGCCCGGTAACCACAACCGCAGCTGCCGATTCGGAGATATTTTTTATCAAGGTGGACCAAATGATCCATTCCTGTTCCAATTGCTGTGATCATCACGCAAAGTTGATTCAGAACATGCTGATGGTCATTGCAGGGAAAAATCTTGTATTGAACCAAAAAATCAACTATCTTCTCATGAAGGGAATGCGGGAAAAGCTGGCCAATTATATGATGGAACAAGCGGTAATTCACAACAGCCCTACCTTTGAAATGAGCTATGACAGGAATTCTCTGGCCGATTATCTGAATGTGGACCGAAGCGCAATGAGCAGGGAGCTGGGCAGAATGCGGGACGAAGGTTTGATTGAATATTATAAGTCCAGTGTTAAAATACTTGATGTTGAAGCATTAAAATCGTTTTGCTGA
PROTEIN sequence
Length: 227
MEYMDKLSQVKLFKGLSPADIETVFHCLQAKRMSYKKGNIITHAGDEIRTIGIVVKGKVEVSKVNISGRKTILTLIDTGELFGEIISFANIKSPVTTTAAADSEIFFIKVDQMIHSCSNCCDHHAKLIQNMLMVIAGKNLVLNQKINYLLMKGMREKLANYMMEQAVIHNSPTFEMSYDRNSLADYLNVDRSAMSRELGRMRDEGLIEYYKSSVKILDVEALKSFC*