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SCNpilot_BF_INOC_scaffold_12941_1

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 1..828

Top 3 Functional Annotations

Value Algorithm Source
UPI0002E419B0 related cluster n=1 Tax=unknown RepID=UPI0002E419B0 similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 224.0
  • Bit_score: 278
  • Evalue 6.70e-72
PBSX family phage terminase, large subunit similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 222.0
  • Bit_score: 253
  • Evalue 8.50e-65
PBSX family phage terminase, large subunit {ECO:0000313|EMBL:CDZ24658.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridi similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 222.0
  • Bit_score: 253
  • Evalue 4.20e-64

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Taxonomy

[Clostridium] cellulosi → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 828
TTTTGTACCGTGAAATTTTCGATGAAGGACAAAACTTCGTTTAGGTTGATGCTGCTTTTTTCAAGATTGTCAAATATGATGATGCTGTTTTTGATGGAGAATGATCCGCTGTATCTGGACCGGCTGCAGCAGCTGGATGAAAATACGAAACGTGCGTTATTGTATGGTGACTGGAATTTGTTTGCGGGCAGGTTTTTTTCGGAGTTCAGCACCGGCGTGCATGTGATCAGTCCTTTTACCATACCCGAGGACTGGAAACGGTATCTGGTCATTGATTACGGGCTGGATATGCTGGCGGCGTTGTGGATTGCCGTGGACAATCACCATCATGCTTATGTGTACCGGGAGGTGTATCAGAGCGGGCTGATTATATCCCAAGCGGCCGAGATGATGATGCAGGCTGAGCAGGGGGAGAAGATTTATGAACGATTGGCGCCGCCGGATTTGTTTAACCGAAGGCAGGAGACCGGGAAGAGTGCGGTGGATATTTTTCTGGAAAACGGTTTGTATTTTACCCGGTCGGAAAACAACCGGGTGCAGGGGTGGTTCAGTCTCAAGGAATGGCTGAAACCGTATATTGACAACAGCGGGGGAAAAGAAATTGTGACCGCCAAGCTGCGGATTTTTAATACCTGCCGTAATTTGATCCGGACATTGCCGGAGGTTCAGGTGGACGGAAAAAATCCCAATGACGTGGCAAGCGAGCCCCACGAGCTGACCCATCTGCCGGACGCATTGCGGGGGTTTGCCATTATGCATCGAAAGGCGATTGACGGAGGTGTCAGGAATAGTGGGGAGTATGAGGGGTTTTTGCATTTTGGTGCTTGA
PROTEIN sequence
Length: 276
FCTVKFSMKDKTSFRLMLLFSRLSNMMMLFLMENDPLYLDRLQQLDENTKRALLYGDWNLFAGRFFSEFSTGVHVISPFTIPEDWKRYLVIDYGLDMLAALWIAVDNHHHAYVYREVYQSGLIISQAAEMMMQAEQGEKIYERLAPPDLFNRRQETGKSAVDIFLENGLYFTRSENNRVQGWFSLKEWLKPYIDNSGGKEIVTAKLRIFNTCRNLIRTLPEVQVDGKNPNDVASEPHELTHLPDALRGFAIMHRKAIDGGVRNSGEYEGFLHFGA*