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SCNpilot_BF_INOC_scaffold_1551_4

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(4006..5364)

Top 3 Functional Annotations

Value Algorithm Source
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 454.0
  • Bit_score: 471
  • Evalue 1.60e-129
tRNA modification GTPase MnmE n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRT5_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 454.0
  • Bit_score: 471
  • Evalue 1.10e-129
tRNA modification GTPase TrmE similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 452.0
  • Bit_score: 431
  • Evalue 2.20e-118

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Taxonomy

[Clostridium] leptum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1359
GTGAATGAGACCATTGCGGCGATTGCGACGCCGTTGTCACCGGGAGGAATCGGAATCATCCGAATTTCCGGCGATGATGCGAAAGCAATAGCCGATCAGCTTTTTGTTTCCCCCTCGGGGGCGTCTTTGTCACAGGCGAAGGGCTATTCGGCACATTACGGATTGCTCAAAGAAAATGGAGAGAAAATCGACGAGTGCATTGCGCTTGTATTTTCAGCGCCAAAAAGCTATACCGGCGAGGATGTTGTGGAATTCTCCCTACATGGTGGTGTTTTTGTGGTAAAAAAAGCATTGCGGGCGGTGTTGTCAACGGGTGCAAGGCTGGCGGAACCGGGGGAATTTACCAAACGGGCTTATTTCAACGGAAAGCTGACGCTGACAGAAGCAGAAGCAATCATGGATATTATTTCGGCAGGAGGAAAGCAGGCACTGCAAGCAGCAAACACAGCCAGAAACGGAGCACTGTATCATAAAATACAGGAAATAACCCAAGGGCTCACCGTTGCTGCCGCTCACATATCCGCTTTCACGGATTTTCCTGACGAAGGCTTGCCGGATATGGATTTCACTTTGTTTGAAGAAAACCTGAGAAAAGCAAAGGAAGAATTGAACCGGCTGCTCTCCACCTTTGACAGCGGAGTGGTTCTGAGAGAAGGCATCAGCTGTGCCATCATTGGCAGACCCAATGTGGGAAAATCAACCCTGATGAATTTACTGTCCGGGTGTGAACGCTCTATCGTAACAGATATTGCAGGAACAACCAGAGATGTGATAGAAGAAACGGTAAAGCTGGGCGAGGTTTTTTTAAGGCTGTCTGATACTGCCGGGATCCGCAACACGGAAGATACGGTGGAATCCATTGGTGTCCACAGGGCAAAGGAACGGCTCAGGGAAGCGGCCCTCATCCTTGCCGTATTTGATGCCAGCGAGGAGCTGACAGACGACGATCGGGAAATTTTAGCTCTTTTGGCTGACAAAAAATCTGTTATCATCATCAATAAAACCGATCTGCCCGTCAAAATGGATATGGATAGTGTGAAGCATTTTAAAACCATTCAAATTTCAGCTGCAAAGGGAACGGGGCTGGAGGAATTGGTAGTGGCAGTCAATGAAACAACAGGACTTGCAGCTTTAGATCCAAACGCAGCTATCTTGGCATCAGAACGGCAAAAAAATTGTGTGATCAAGGCAAATCAAGCAGTTACAGCGGCAGAAAATGAATATAAGACCGGGCAGATGCTGGATATTGTGGGATTTGAGCTGGAGGAAGCCATTACGGCACTATTGGAGCTAAACGGCGAAAAAGCAAGTGAAACGGTAGTCAATGAAGTTTTCAGCCGTTTCTGTGTAGGGAAATAA
PROTEIN sequence
Length: 453
VNETIAAIATPLSPGGIGIIRISGDDAKAIADQLFVSPSGASLSQAKGYSAHYGLLKENGEKIDECIALVFSAPKSYTGEDVVEFSLHGGVFVVKKALRAVLSTGARLAEPGEFTKRAYFNGKLTLTEAEAIMDIISAGGKQALQAANTARNGALYHKIQEITQGLTVAAAHISAFTDFPDEGLPDMDFTLFEENLRKAKEELNRLLSTFDSGVVLREGISCAIIGRPNVGKSTLMNLLSGCERSIVTDIAGTTRDVIEETVKLGEVFLRLSDTAGIRNTEDTVESIGVHRAKERLREAALILAVFDASEELTDDDREILALLADKKSVIIINKTDLPVKMDMDSVKHFKTIQISAAKGTGLEELVVAVNETTGLAALDPNAAILASERQKNCVIKANQAVTAAENEYKTGQMLDIVGFELEEAITALLELNGEKASETVVNEVFSRFCVGK*