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SCNpilot_BF_INOC_scaffold_1738_6

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 2599..2919

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MIK8_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 100.0
  • Bit_score: 172
  • Evalue 2.00e-40
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubac similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 100.0
  • Bit_score: 172
  • Evalue 2.80e-40
SSU ribosomal protein S13P similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 100.0
  • Bit_score: 165
  • Evalue 8.90e-39

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Taxonomy

Eubacterium sp. CAG:180 → Eubacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 321
ATGGCGCGTATAGCGGGTGTAGACTTACCGAGAGATAAAAGAATAGAGTTCGGACTGACCTATATCTATGGTACCGGCCGCAAGACTGCAAGTGAAATACTTTCTTCAACAGGTGTAAATCCCGACACGAGAGTGAAGGATTTATCAGAAGAAGATGTTTCAAAGATGCGTGATTATATTGACAAGAATGTTCAGGTGGAAGGCGATCTTCGCCGTAACATCGCATTTGACATCAAGAGATTAATCGAAATCGGCAGTTATCGCGGAGTACGTCACCGTAAGAACCTTCCTGTCAGAGGGTGTTCCCGCATGCTATCATAA
PROTEIN sequence
Length: 107
MARIAGVDLPRDKRIEFGLTYIYGTGRKTASEILSSTGVNPDTRVKDLSEEDVSKMRDYIDKNVQVEGDLRRNIAFDIKRLIEIGSYRGVRHRKNLPVRGCSRMLS*