ggKbase home page

SCNpilot_BF_INOC_scaffold_1738_24

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 18198..18803

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y5Z3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 37.0
  • Coverage: 108.0
  • Bit_score: 71
  • Evalue 1.50e-09
Uncharacterized protein {ECO:0000313|EMBL:CEO88614.1}; TaxID=499207 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Syntrophacetic similarity UNIPROT
DB: UniProtKB
  • Identity: 28.8
  • Coverage: 184.0
  • Bit_score: 99
  • Evalue 5.70e-18
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.0
  • Coverage: 108.0
  • Bit_score: 70
  • Evalue 7.40e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Syntrophaceticus schinkii → Syntrophaceticus → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 606
ATGGCTAAAATCATTGAGGACAGCATTAAAAACCGCATTCTTGGTGAATCAGTGAAGTGTTTTGCCGAAAAAGGGTATCGTGGTACATCCATGCGTGATATTGCCAATCAGGCTGAATGTAGTTTACCGATGCTTTATTATTACTATAAAAATAAAAAGCAGCTTTTTGAGGAAGTTGCCTTCAACGAGTTCGTTTTTACCAATGACAGACTCAATAAAAACATACCTTTCGACGATAATTTACAGAATTTCTATAAAAGCTTGCTGAAAAGCAGGAAGAAGCTATATCCCTTTGAAAATTCTCTTTACAAAATCTCATTACAAACCTTTTTTGGCTTTGATGATTTACCGGAACTGACACAGAAAATGAGAGAATGGTACATAAATCTAGAAAACCATCATATAGAACTTATCAAAAAATATTATAGAAGTAAAAATATTGATCTCATTGCTCTTCTCATATCACGATACATTAATGAGGTAACCACGAAAATTGTTTTCGGAATTACGATTTATGACGAAGAGATAGAGAATGAGATAGACTTTCTTTTTAAAATGCTGAAGAGGAAAAATATAAAGACAGAACCACGAATAAAAAAGGTGTAA
PROTEIN sequence
Length: 202
MAKIIEDSIKNRILGESVKCFAEKGYRGTSMRDIANQAECSLPMLYYYYKNKKQLFEEVAFNEFVFTNDRLNKNIPFDDNLQNFYKSLLKSRKKLYPFENSLYKISLQTFFGFDDLPELTQKMREWYINLENHHIELIKKYYRSKNIDLIALLISRYINEVTTKIVFGITIYDEEIENEIDFLFKMLKRKNIKTEPRIKKV*