ggKbase home page

SCNpilot_BF_INOC_scaffold_2140_12

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 7573..7929

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TA39_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 111.0
  • Bit_score: 153
  • Evalue 1.40e-34
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 111.0
  • Bit_score: 153
  • Evalue 3.90e-35
Transcriptional regulator {ECO:0000313|EMBL:AGN26228.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 111.0
  • Bit_score: 153
  • Evalue 1.90e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanomassiliicoccus intestinalis → Methanomassiliicoccus → Methanomassiliicoccales → Thermoplasmata → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 357
ATGGATCAACAGCTTGAAATCTGTAACTGCGAAGTAATCCACGGTGAGGTTGTGAGCAAGGTCAAATCCCAACTGCCGGAAAAGGATACACTCAGACAGCTGGCGGATTTATATAAGGTGTTTTCAGACTTTACCCGTGTTCAGATTTTATGGGCACTGGAATTGAATGAGCTTTGTGTGTGCGACCTGGCATCCCTGCTCAATATGACGGTTTCGGCCATATCTCACCAACTCAAGGCGCTTCGGGTTGCCAATCTCGTCAAAACCCGCAGGGATGGCAAAATCATTTATTATTCCTTGTCGGATGACCACGTGAAAAGCATTCTGTTAACCGGTTTTGAACATGTCAATGAATAA
PROTEIN sequence
Length: 119
MDQQLEICNCEVIHGEVVSKVKSQLPEKDTLRQLADLYKVFSDFTRVQILWALELNELCVCDLASLLNMTVSAISHQLKALRVANLVKTRRDGKIIYYSLSDDHVKSILLTGFEHVNE*