ggKbase home page

SCNpilot_BF_INOC_scaffold_2498_11

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(6640..8694)

Top 3 Functional Annotations

Value Algorithm Source
Peptidase U32 family n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5YV44_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 686.0
  • Bit_score: 613
  • Evalue 3.70e-172
Peptidase U32 family {ECO:0000313|EMBL:CDA20482.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 686.0
  • Bit_score: 613
  • Evalue 5.20e-172
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 700.0
  • Bit_score: 523
  • Evalue 8.30e-146

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus sp. CAG:488 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2055
ATGAAAACGGAAATACTGGCACCGGCAGGGTCTCAAGAGTCCCTGGAGGCTGCCGTCAGAGCGGGTGCGGACGCAGTTTATCTGGGAACGGGAAACTATAACGCCAGAAGAAATGCAGCCAATTTTAATGAGGAACAATTAAAAGCCGCCATTCAATATTGTCATAAACGGGGTGTCAGAGTGTATATCGCTCTGAACACCCTTATTTCAGATACAGAAATGAAGGATGCCATGGAAACCGTCAGAATGCTCTGCGCCCTGTCGCCGGACGCACTCATTCTGGCGGACTTGGGGCTGATTGATGCCGTCAAAGAAGCGGCGCCGGATATGCCCCTGCATGGGTCCACCCAAATGTCCGTCCACACCCCGGCAGGGGTTCGGCAGCTTTCAGAAATGGGGATCAAGCGGGTAGTGCTGGCAAGAGAGCTGTCAAAAGAAGAAATCAAAGAAATTGGCGCAGAAGCCAAGAGGCTGGGTGTCGAGCTGGAGCTTTTTGTCCATGGTGCGCTGTGCATGTCTGTTTCCGGGCAGTGCTATTTCAGCGCTGTGTTGGGAGGACGAAGCGGAAACAGAGGACTTTGCGCAGGTACCTGCAGACTGCCCTTTTCTGTGAAAAACGGTACGGGGTATGATTTGAGCCTGAAGGATTTGTCCCTGCTGGAGGAAATCACAATCCTTCGGCAGATGGGGATCGATTCGCTCAAAATTGAAGGCAGGATGAAACGGCCGGAATATGTGGCAGCCGCGGTGAACGCTTACCGACAGGCAGTGGATCAGGGCAGCGTGAAACAAGAGGACATGGAAAACCTACAAAACGTCTTTTCCCGCAGCGGGTTCACCAAAGGCTATTTTGAAGGAAAAACCGGCAGAGATATGTTCGGCATACGGGCAAAGGACGATGTAATCAACTCCAATGAGGTATTGAACGCTCTGCACGCCCTATATCGGGGCGAACGGCAATCTGTTTCCCTTCATATGGAACTCAAGGTGGATGCCGATACCCCGGCGACGCTTACTGTATCAGACGGGGAGAAGATTGTTACCGCTGTCGGAGAAATCCCTCAGCAGGCGGTGAACCGCCCCTTAACAGAGGAATATGCCCTGTCTCAGCTGGCCAAAACCGGCGGCACACAATATTACATCAAAACCGCCCGGGCGGAAATCGGACAAGGGCTGATGCTGAGTGCTTCCGCATTGAATGCACTGCGCAGAGACGCCCTCGCCGGACTGGATGAAGAAAGGGGACAAAGAGACCCGGTCGCGTTTCGGGAGACGGTCTTGCCCGCCAAGAAAAAGGCGGTCTATCAAAAGCCCAGGATCGTAATTTCTGTAAAAAACACCACCGGGCTGCCCGGAAGCCTTCCCGGTGTCAGCCTTGTCTATCTTCCGCTCTTTGCCAAGGACGAAGAGATAAAAAAAGCGTTGCAAAGGAACGTTGAGGTAGGTGTCAGGGTTCCGAGAGGGATGTTTTCGCTGGAGGACTCCATCCGGAAAAGACTGCATAAAGTAAAAGCATTGGGCATTACCACGGCCCTTGCTGAAAATATTGGCGCCATTCCGCTGATTCAGCAAGCAGGTATGACAGTACAGGGCGGGAACGGGCTGAATGTGTTCAATTCCCAGTCGCTACAGGTGGTCGCTGACCTAGGCATTACAAAACAGACCGTGTCCCACGAGCTTAGCCTGGACAGCATTTCAGTGCCGCAAAGCCGAATCCCGCTGGGCTTATTCGCCTATGGCAGACTGCCACTGATGCTGCTTCGCAACTGTCCGGTCAAAAACGGGGGAGACTGCAGCACCTGCACCGGTGAAATCGTTGACCGTAAAGACATCCATTTTCCTTTACAGTGTGAGAGTGGCTGTACAGAGCTGCTGAATTCCGCTCCTCTTTGGCTGGCGGACCGATTACAGGAAATTTCTAATATCGATGATCTGTTTCTGAGCTTTACGGATGAAACCCCGGAACAGACAGAGGCTATCATAAAAAGCTATGTGACAGGCGGAGAACCCCCCAGAAAATATACCAGAGGAAACTATTATAAGGGCGTGTTATAA
PROTEIN sequence
Length: 685
MKTEILAPAGSQESLEAAVRAGADAVYLGTGNYNARRNAANFNEEQLKAAIQYCHKRGVRVYIALNTLISDTEMKDAMETVRMLCALSPDALILADLGLIDAVKEAAPDMPLHGSTQMSVHTPAGVRQLSEMGIKRVVLARELSKEEIKEIGAEAKRLGVELELFVHGALCMSVSGQCYFSAVLGGRSGNRGLCAGTCRLPFSVKNGTGYDLSLKDLSLLEEITILRQMGIDSLKIEGRMKRPEYVAAAVNAYRQAVDQGSVKQEDMENLQNVFSRSGFTKGYFEGKTGRDMFGIRAKDDVINSNEVLNALHALYRGERQSVSLHMELKVDADTPATLTVSDGEKIVTAVGEIPQQAVNRPLTEEYALSQLAKTGGTQYYIKTARAEIGQGLMLSASALNALRRDALAGLDEERGQRDPVAFRETVLPAKKKAVYQKPRIVISVKNTTGLPGSLPGVSLVYLPLFAKDEEIKKALQRNVEVGVRVPRGMFSLEDSIRKRLHKVKALGITTALAENIGAIPLIQQAGMTVQGGNGLNVFNSQSLQVVADLGITKQTVSHELSLDSISVPQSRIPLGLFAYGRLPLMLLRNCPVKNGGDCSTCTGEIVDRKDIHFPLQCESGCTELLNSAPLWLADRLQEISNIDDLFLSFTDETPEQTEAIIKSYVTGGEPPRKYTRGNYYKGVL*