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SCNpilot_BF_INOC_scaffold_2345_7

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 6662..7498

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator AraC family n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H4H0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 38.3
  • Coverage: 287.0
  • Bit_score: 204
  • Evalue 1.60e-49
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDE34196.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 38.3
  • Coverage: 287.0
  • Bit_score: 204
  • Evalue 2.30e-49
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 266.0
  • Bit_score: 192
  • Evalue 1.40e-46

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Taxonomy

Ruminococcus sp. CAG:403 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 837
ATGCAGCACATGAAACAACCCGGGGTTTATGATAAAAAATTCCCCTTTACATTAAATAGCACAAAAGGCGTGAATCCAAACAGCCGGGTGCTGCACTGGCACCGGGAATTGGAAATTTGCTATGTAAAAGAAGGCACCGGCAAGTATCTGATCAACGGAAACGAATACACGGTGAATCCCGGTGATATTTTCATCATCAACAACGATGAAATCCATTTGTGTTATGACGACAACGATTTGACGATGCTGGTCATCCTGTTTGACCCGTCTATTTTATCCGGCGGTGCAAATGTTTTGGATCACGAATATTTGCTGCCGTTTTTAGAAGCAGGGCAAACCTTTTACAACAAAATTCCCGCAGAAGAGAACAACAGCCGCATGACTGCCGTGTTATCGGAAATGGAAGAGGAGTATGTGTCCCGCCGTCCGTTTTATGAACTCATGCTGAAATCCCAAATCCTTCGGCTGCTCACGTTTATCCTTCGATATTACAGAAACGAAGATACGCCCCGGAACATTACCCGCAGCAATATCGGCAAAAGCGTGTTCGAGTTTATCGACGGGCGTTATAAAAATCCCATCACCGTGCAAGAACTGGCGGATATCGCCGAAATGAGCACATCCCATTTTAGCAGCATGTTCAAAAGTTTTGCCGGTGTTTCTCCCATGGAATATATCATTCAAAAGAGAATCACATCGGCAATGGAAGCGTTGAAAACCACCAATGACAGCATTCTCGATATCGCAACAAACTGCGGGTTTCAGTCCCTGTCCAATTTCAACCATATTTTTAAAAAACAAACAGGAGCTTCGCCATCCGGTTACAGAAAATCGTAG
PROTEIN sequence
Length: 279
MQHMKQPGVYDKKFPFTLNSTKGVNPNSRVLHWHRELEICYVKEGTGKYLINGNEYTVNPGDIFIINNDEIHLCYDDNDLTMLVILFDPSILSGGANVLDHEYLLPFLEAGQTFYNKIPAEENNSRMTAVLSEMEEEYVSRRPFYELMLKSQILRLLTFILRYYRNEDTPRNITRSNIGKSVFEFIDGRYKNPITVQELADIAEMSTSHFSSMFKSFAGVSPMEYIIQKRITSAMEALKTTNDSILDIATNCGFQSLSNFNHIFKKQTGASPSGYRKS*