ggKbase home page

SCNpilot_BF_INOC_scaffold_2555_4

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(4978..5427)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial membrane protein YfhO n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P8Q0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 149.0
  • Bit_score: 139
  • Evalue 3.40e-30
Bacterial membrane protein YfhO {ECO:0000313|EMBL:CCZ05392.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eub similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 149.0
  • Bit_score: 139
  • Evalue 4.80e-30
cell wall teichoic acid glycosylation protein similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 138.0
  • Bit_score: 109
  • Evalue 8.20e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Eubacterium sp. CAG:603 → Eubacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 450
ATGAATAGTATATTTGAATTGGGAAAGAAATACATCAATAAAGAAACCGTCAGTTATATCATTTTCGGCGCTTTGACCACTGCCGTGGATTTTGTTTTTTTTACCATATCCAATTTTGCAATTGATGCCTTTTTCAGTGTGGACAATGCGACAAAGGCAATGATATCGAATTCTATTGCTTGGGTGTTTGCGATTGTTTTTGCTTTTATCACCAACAAGCTCTTCGTGTTCAACAGCAAAAGCCTTCAGGCGGCGTTGGTTGTCAAAGAGCTCATTGCATTTGTACTCAGCAGGCTGTTTTCTCTTGTTGCCAGTCTTGTTTGGCTTTATGTTACTATCAAATGGTTTGGGATGAATGACCTTGTGTCCAAGCTGTTTAGTTATATCTTTGTTATAATCATGAACTATGTTACCAGCAAGCTGTTTGTTTTCAAAAAAGTACAGAAATAA
PROTEIN sequence
Length: 150
MNSIFELGKKYINKETVSYIIFGALTTAVDFVFFTISNFAIDAFFSVDNATKAMISNSIAWVFAIVFAFITNKLFVFNSKSLQAALVVKELIAFVLSRLFSLVASLVWLYVTIKWFGMNDLVSKLFSYIFVIIMNYVTSKLFVFKKVQK*