ggKbase home page

SCNpilot_BF_INOC_scaffold_2623_6

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(2923..5091)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518};; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrion similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 729.0
  • Bit_score: 615
  • Evalue 8.50e-173
hypothetical protein n=1 Tax=Desulfovibrio desulfuricans RepID=UPI0003649A14 similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 715.0
  • Bit_score: 655
  • Evalue 6.90e-185
traE; Prokaryotic type I DNA topoisomerase similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 744.0
  • Bit_score: 530
  • Evalue 9.40e-148

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bilophila wadsworthia → Bilophila → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2169
ATGAATCGTGTGTTTATCGCTGAAAAACCCTCCATGGGGAGGGCCCTTGCAGCTATACTGGGACGGCCCGTTCCCAAAGAGGGATACATTGCAGTTGGAGATGATGCCGTTACCTGGTGCTTTGGCCACCTGCTAGAAGCTGTGCCCCCTGAAGGCTATGATCCAGAGCTGAAGATCTGGCGTCGGGAAAGTCTTCCTATTATTCCCAACACGTGGAAAATGGAAGCTCGGAAGGATGCCAAGGGGCAGGTGAAGGTGATTCGCGAACTGCTGCGCCAAGCTTCAACAGTCGTGAACTTTGGCGACCCCGAGCGTGAGGGGCAGCTTATCGTGGATGAGTTGCTGCAACATTTGGCGTGGAAAGGCCATACTCTCAGGCTATGGCTGAACTCTACAGACGAAAAAAGTATCCGCAAGGCGCTAGCCAGCATGAGTGACAATGCAAACTATGTGAACCTGAGCCATGCAGCACTAGCCCGCAGTCGCTCAGACTGGTTGGTTGGGTTGAACCTCACTCGGGCGCTGACACTCATAGGGCGAAGTCAAGGCGTGATTCCTAGTGGACAAGTCTTGTCGGTGGGTAGGGTCCAGACTCCAGTGCTCCATATCGTTGTGATGCGTGACGAAGAAATCGAGCGCTTTGTTCCAAGAGATTTCTTCATTCCGTACATTCAAGCAGCACACAAAAATGGAGAGTTCAAGGCCAAATGGTATCCACAAGAAAACATGGAGGGGTTGGATAGCGACAATCGCCTTGTGAGTGAGAAGGTGGCGAAAGAGATTGTTGACGCAGCTACGGGGAGGTCAGGTGTTGTCACCTCCATGGAGAGTAAGCTCCAGAAGAAGGAACCGCCGTTGCCTCACACTCTCGGATCCCTCCAGGCGGCTGCGGATAGCCAGTATGGATTAAGTGCGCAGGCGACACTGGACATTGCTCAGAGTTTGTATGAGCGGCAATTCACTTCCTATCCACGAACAGACTGCCCCTACCTGAAAGAAGAGCAGTTTGCAGACGCTGAAGAACTTCTCAAATCATTAGCTGAGGCAGGATGTAGGGGCGCAGAGAATGCAAATCATGAACTTCGCTCCGGAGCATGGAATTCTGCCAAAGTTGAAGCCCACCACGGCATCATACCAACTGGGGTGAAACCCTCAGGCCTGAAGCCCGATGAAGAACGGATCTATGCCTTGATTGCCGAGGGTTATATCTGCCAGTTTTATCCTCCCTATCAATACATGGCTCATACCGTCGTCGTGGATCTTGGCGGGAACGTATGGAAGGCCTCCGGTCGCTCTGTTGTGGATCTCGGCTGGCGCGGCATCTTCACGGCCGATGACGAAACCAAAGATTTGTTGCTTCCCGCTGGAATGGCCAAAGGAGATCCCATTGAATGCCTGAAAGCAGAATATGAGGCCAAGAAGACTACACCTCCAGCTCGTTACACTGAGGGCACGTTGCTCGACGCCATGCAGCACGTGGATCGCTTCGTCACCGATCCGCGCATGAAGAAGTATCTTAAAGACGCGAAGGGCATCGGAACTTCCGCGACTCAAGCTGGCATTATCGAGACGCTCAAGGGGAGAGGATTTCTTTCACGCAAGGGAAAGCAGCTCGTGTCAACAGCGTTGGGACGAATGCTGGTCAACGCTGTACCTCTACCTTTGAAGGACGTGCAGACGACTGCGATATGGGAGGCACTGCTATCCAAGATGGCGTCGGGCGATATTGCGTTTGAAGCCTTCATGTCGGAGCAGGAGCGCCTTGTGCGTTCCCTGCTTCAGCAAACAGAGTTGGTCAAATTCCCAGGCGCAAAGCCTCCGACGCTCTGTCCCGAGTGCGGGCAGGCGCTACAACTCATGTCGAGTAAAAAAAGTGGAGCGTACTGGGCCTGTTTCAATAAGGCAGGACACAACGGATCGAACGCCTACTACCCGGATGACAATGGGCGGCCGGGTAAAAAGCGGGAACCAGCAGTGGCCACTGGACCTATGATTCCATGTCCTGAGCCGGGATGCGGGAAGAATATGCGAAGGCTGGAGAGTTCCAAAAAGGCAGGCTGCTTTTTCTGGGTGTGTGAAAACAAAGCGCACCCAATCCGGAAAGACGTTGAAGGACGGCCAGGAGACCCCTTTGAAGCGAGTTTAAAAGCTAAACGAGGGAAAAAGTGA
PROTEIN sequence
Length: 723
MNRVFIAEKPSMGRALAAILGRPVPKEGYIAVGDDAVTWCFGHLLEAVPPEGYDPELKIWRRESLPIIPNTWKMEARKDAKGQVKVIRELLRQASTVVNFGDPEREGQLIVDELLQHLAWKGHTLRLWLNSTDEKSIRKALASMSDNANYVNLSHAALARSRSDWLVGLNLTRALTLIGRSQGVIPSGQVLSVGRVQTPVLHIVVMRDEEIERFVPRDFFIPYIQAAHKNGEFKAKWYPQENMEGLDSDNRLVSEKVAKEIVDAATGRSGVVTSMESKLQKKEPPLPHTLGSLQAAADSQYGLSAQATLDIAQSLYERQFTSYPRTDCPYLKEEQFADAEELLKSLAEAGCRGAENANHELRSGAWNSAKVEAHHGIIPTGVKPSGLKPDEERIYALIAEGYICQFYPPYQYMAHTVVVDLGGNVWKASGRSVVDLGWRGIFTADDETKDLLLPAGMAKGDPIECLKAEYEAKKTTPPARYTEGTLLDAMQHVDRFVTDPRMKKYLKDAKGIGTSATQAGIIETLKGRGFLSRKGKQLVSTALGRMLVNAVPLPLKDVQTTAIWEALLSKMASGDIAFEAFMSEQERLVRSLLQQTELVKFPGAKPPTLCPECGQALQLMSSKKSGAYWACFNKAGHNGSNAYYPDDNGRPGKKREPAVATGPMIPCPEPGCGKNMRRLESSKKAGCFFWVCENKAHPIRKDVEGRPGDPFEASLKAKRGKK*