ggKbase home page

SCNpilot_BF_INOC_scaffold_2629_1

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(1..393)

Top 3 Functional Annotations

Value Algorithm Source
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clost similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 130.0
  • Bit_score: 141
  • Evalue 1.10e-30
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Clostridium sp. MSTE9 RepID=J0WUM3_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 130.0
  • Bit_score: 141
  • Evalue 7.90e-31
ATP/GTP-binding protein similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 136.0
  • Bit_score: 125
  • Evalue 9.70e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. MSTE9 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 393
ATGAAAAATATCGCCGACTTCTACTATGTAGAGGTCGGCGACGCACTCATTGAGTGTAAACCCCGGGGTATTTTCAGAAAAAGCGGGGTTACACCATTGGTCGGTGATATGGTGACGGTCACCATCGGCAAGGACGGCAAAGGGATGATTGAAGAAATCGCTAAGCGGAAAAACAGCCTGGCAAGACCGCCGCTGGCCAATTTGGACAAGTTATTTATTGTATCCTCGTTGTCTGACCCAAAACCCAATGCCTTTGTGATTGATACTATGACTGTCTTTGCAGAGGACAAATCCATTGAGCCGGTAATTGTTATCAACAAATGTGATTTGTCTGACGATGACAGCATTATAAAAATCTATGAGGATGCCGGGTTCCGTGTAATAAAAACCTCG
PROTEIN sequence
Length: 131
MKNIADFYYVEVGDALIECKPRGIFRKSGVTPLVGDMVTVTIGKDGKGMIEEIAKRKNSLARPPLANLDKLFIVSSLSDPKPNAFVIDTMTVFAEDKSIEPVIVINKCDLSDDDSIIKIYEDAGFRVIKTS