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SCNpilot_BF_INOC_scaffold_2597_11

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 10754..11098

Top 3 Functional Annotations

Value Algorithm Source
Hydrogenase expression/synthesis HypA n=7 Tax=Clostridium thermocellum RepID=A3DJT5_CLOTH similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 112.0
  • Bit_score: 144
  • Evalue 8.20e-32
hydrogenase nickel incorporation protein HypA similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 112.0
  • Bit_score: 144
  • Evalue 2.30e-32
Hydrogenase expression/synthesis HypA {ECO:0000313|EMBL:ABN54214.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium th similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 112.0
  • Bit_score: 144
  • Evalue 1.10e-31

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Taxonomy

Ruminiclostridium thermocellum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 345
ATGCATGAGCTTTCCATCACAAAGCAAATTGTTGCAATCTGCGAGGATTTTGCCGGGAAGCACAGTGCAAGCAAGGTCACCAAAATCAATCTTGTGGTGGGCGAGGCAACCGGCTATATCGCAGAGTCAATCCGGTTCTATTTTGATATACTGGCAAAGGATTCGATTTGTAAGGATGCGAAAATCACTCTGGAAACCGTCAAGCCGTTGCTGTTGTGTACAAGCTGTCAGCAGTATTTTGAACGGGTTCCCTTTTCCTTTGACTGCCCTTTGTGCGGCGGGCAGGGAGAACCCACGGAAATCGGCAGAGAATTTTATGTGAAATCCATAGAAATTGAGGAATAA
PROTEIN sequence
Length: 115
MHELSITKQIVAICEDFAGKHSASKVTKINLVVGEATGYIAESIRFYFDILAKDSICKDAKITLETVKPLLLCTSCQQYFERVPFSFDCPLCGGQGEPTEIGREFYVKSIEIEE*