ggKbase home page

SCNpilot_BF_INOC_scaffold_2639_1

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(2..322)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=2 Tax=Clostridium RepID=A7VR38_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 107.0
  • Bit_score: 156
  • Evalue 1.10e-35
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 107.0
  • Bit_score: 156
  • Evalue 1.60e-35
LSU ribosomal protein L6P similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 107.0
  • Bit_score: 149
  • Evalue 5.10e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] leptum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 321
ATGTCACGTATAGGTAGAAAACCAATCGCAATTCCGGCTGGTGTTGAAATTAAGATTGAGGACAATCTGGTATCTGTAAAAGGACCAAACGGCAGTCTTTCAACAGCCATTCATAAGAATATCGCCATAACGGTAGAAGGCAGCGAAATCAATGTTACCCGTCCGAATGATGACAAAGATAACAAAGCACTTCATGGTTTATCCCGGACACTGATCTCCAACATGGTTGACGGTGTTACAAAAGGCTTCAAAAAGGAGCTGGATGTTAACGGTGTCGGTTATCGTGTTTCCAAGCAAGGGAAAGCACTGGTTATGAACTTA
PROTEIN sequence
Length: 107
MSRIGRKPIAIPAGVEIKIEDNLVSVKGPNGSLSTAIHKNIAITVEGSEINVTRPNDDKDNKALHGLSRTLISNMVDGVTKGFKKELDVNGVGYRVSKQGKALVMNL