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SCNpilot_BF_INOC_scaffold_2639_10

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(3127..3798)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037A9FD5 similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 222.0
  • Bit_score: 363
  • Evalue 2.20e-97
rpsC; 30S ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 222.0
  • Bit_score: 366
  • Evalue 7.30e-99
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi. similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 222.0
  • Bit_score: 366
  • Evalue 3.60e-98

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Taxonomy

[Clostridium] cellulosi → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 672
ATGGGCCAGAAAATTAATCCCCACGGTCTTCGTGTAGGCGTAATTAAAAATTGGGATAGCCGTTGGTTTGCAAAGGACAGCGATTTCGGTGATTTGGTTGTGGAAGACTATAAGCTGCGTAAGTTTCTAAAAGAAACCCTTCGCATGGCTGGCGTTCCAAAAATTGAAATAGAACGTGATGCATCCCGTGTGCGTATTTTTGTACATTGTGCAAAACCGGGCATGGTAATCGGTCGCAGCGGTTCTGAAATCGATAAATTAAAGATTAAATGCGAGAGCATGTTAAAAAAGCCTGTCGTGCTGAACATTGTCGAGGTCAAGAGCCCTGACTTGAATGCACAATTGGTTGCAGAAGCAGTTGCCGCACAGCTGGAAAAACGTATTTCATTCCGTCGTGCGTTGAAACAAGCAATGGGCCGCACCATGAAATTGGGTGCAAAAGGTATTAAAACACAGGTATCCGGTCGTTTGGGCGGTGCAGAAATTGCTCGTACCGAGCATTATCGTGAGGGTACCATTCCGCTTCAGACACTCAGAGCCGACATTGACTATGGTTTTGCCGAAGCAAACACAACCTACGGTAAAATCGGCGTTAAAATCTGGATTTATTCCGGAGAGGTTTTAAAGAGGGCTGCAAAACCCAAGCCCCGCAGGGAAGGAGGCAGTCTCTAA
PROTEIN sequence
Length: 224
MGQKINPHGLRVGVIKNWDSRWFAKDSDFGDLVVEDYKLRKFLKETLRMAGVPKIEIERDASRVRIFVHCAKPGMVIGRSGSEIDKLKIKCESMLKKPVVLNIVEVKSPDLNAQLVAEAVAAQLEKRISFRRALKQAMGRTMKLGAKGIKTQVSGRLGGAEIARTEHYREGTIPLQTLRADIDYGFAEANTTYGKIGVKIWIYSGEVLKRAAKPKPRREGGSL*