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SCNpilot_BF_INOC_scaffold_2639_15

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(5710..6333)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Clostridium sp. CAG:352 RepID=R6RBV8_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 207.0
  • Bit_score: 292
  • Evalue 4.40e-76
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostr similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 207.0
  • Bit_score: 292
  • Evalue 6.10e-76
LSU ribosomal protein L4P similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 207.0
  • Bit_score: 285
  • Evalue 8.90e-75

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Taxonomy

Clostridium sp. CAG:352 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 624
ATGCCTACATTAGCAGTAGTTGATACAGCAGGCTTAAAGGTATCTGATATCGAATTGAGCGATGCTGTGTTCGGAATAAAGCCGAATAAAGTCGTCATCCACATGGCAGTCGTGAATTATTTGGCGAATCAGCGTCAGGGCACACAATCCGCTCTGACACGCGCCGAGGTAAGAGGCGGCGGTCGCAAACCTTGGAGACAAAAGGGTACAGGCCATGCAAGACAGGGCTCGACCCGCTCTCCGCAATGGAGACACGGCGGTATCGTATTCGCACCAAAGCCCCGCGATTACCGTTTTGCTTTAAACAAAAAAGTTCGTCAGCTTGCAATCAAATCCGCTCTTTCCGATAAAGTTCTTGAGAACAGCCTTATTGTTCTTGACAGCTTTAACCCCGAAGAGTTCAAAACCAGATTTGTTGTGAACACCTTAAAGGCAGTCGGAGCTTCTCAGAAGACACTGATTATCCTTGAGGACAACAACAAAATGGCAGTAACCAGCGCTAGAAATATCCCGGGTGTGAAAACGGCACAGGTCAACACCATCAACACCTACGATATCGTAAACGCAACTACACTGGTGATTGTAAAAGGTGCTGTCGAGAAGCTTCAGGAGGTATATGCATAA
PROTEIN sequence
Length: 208
MPTLAVVDTAGLKVSDIELSDAVFGIKPNKVVIHMAVVNYLANQRQGTQSALTRAEVRGGGRKPWRQKGTGHARQGSTRSPQWRHGGIVFAPKPRDYRFALNKKVRQLAIKSALSDKVLENSLIVLDSFNPEEFKTRFVVNTLKAVGASQKTLIILEDNNKMAVTSARNIPGVKTAQVNTINTYDIVNATTLVIVKGAVEKLQEVYA*