ggKbase home page

SCNpilot_BF_INOC_scaffold_2754_5

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 3239..5002

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=[Clostridium] glycolicum RepID=UPI0003708279 similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 577.0
  • Bit_score: 896
  • Evalue 1.10e-257
ABC transporter {ECO:0000313|EMBL:KGK90261.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 577.0
  • Bit_score: 910
  • Evalue 1.00e-261
ABC transporter-like protein similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 577.0
  • Bit_score: 893
  • Evalue 2.60e-257

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. HMP27 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1764
ATGATAAAAGTTGAAAATTTGTCCTACTCATTTCCACAAAAAAATCTATATAATAAGATTTCATTTACATTAGAAGATGGTCAACATTGTGCTTTTATAGGTACAAGTGGAAGTGGAAAAAGCACACTGATAAATATAATTATGGATCCAGAAAAATATATGTTTGATGGTAAGTTAGAGATAGACCCAAATTGTAGAATTGGGTATGTAAGCCAATTCTCACAATTAGACAAACCAAAAGAAACTACTGTTTTTGAATATATAAGCGAAAAATTTATTAAGCTGCAAAATGAAATAACCTCCATTTGTGCTGAAATGGAAACATCTTCGGATATAGATACTTTACTGGAAAAGTACCAACAAGCTCAAGACGCGTTTGATGCAATTAACGGCGATGAATTTGAAAGCAACATTAATAAAAAACTAAATCTTGCAGACTTAAGTAATCATAAGGGTCTAATGATATCTGAGCTAAGTGGTGGCGAATTTAAACTTGTTCAAGTTATTAAGGAAATGCTTAATCGTCCTGACTTAATAATTATGGATGAACCCGATGTGTTTTTAGACTTTGAAAATATTAATTCGCTTAAAAACCTAATTAATTCTCACAAAGAAACAATTTTAGTTATTACTCACAACAGATATCTATTGAATCATTGTTTTAATAAAATTTTACACCTTGAAAACATGGAACTCCAGGAATTCGACGGAACATATATTGATTATAACTTCTCATTACTGCAAGCTAAAATTGAGTTACAAGAGCTTGCTGCTGCCGATGATGAAGAAATCAAGAGAAACGAGATTTTAATTAATAAATTAAGATTTCTTGCAACTGAAGTTGCTGATGCATCTAAAGGAAGAGCTCTAAAAGCCAGAGTTAAAATTCAACAAAGATTAATGGAACGTAGGATTAAAACGCCATTCGTAGATATTAAACAGCCAAATATCAGTTTAGCTACTGATAATAAAATCGAAGAAACCATTGCTTTAAAAGTTAATGATTACAGTGTTTCCTTTGACGAGATACTATTAGAAAATGTTAACTTTGAGATTAAATCTACTGATAAAGTAGCTCTTATTGGCCCAAACGGTACAGGAAAAACAACTTTATTAAAAGACATCTATAAAAATGATCATGATTCCATTGAAATAAATGGTGACGTTAAAGTTGCTTATTTATCTCAAAATCAAGGAGAAATACTAAACGAAAGAAATACAATACTTGAAGAGTTTGCAGATGTTGGATTTGAAACTTATCAAGAAATTAAATCATATCTTTCAAATTATTGTTTTAATGAAAAACTCGTTAATCAAAAGATAGGATCTTTATCTGGTGGAGAAAAAAACATACTGCAATTGGCTAACGTTTCAGCTAGTAACGCGAGTATGTTGCTACTCGATGAACCTACAAGCCATTTGGACACCTATTCACAAATAGCACTTGAAAAGGCCATAGAAAACTATAACGGCGCAATTTTAATGATTTCTCATGATTACAATTTTATAGTAAATTGTATGGATTATGTTTTAATCATTGAAGATAAGACAATTAGAAAAATGAGTATGCGGAAATTCAGACAGATGATTTATGCCAAGCATTTTGATAAAGACTATTTAGAAATTGAGCAAAAGAAAAAATCCGTTGAAACAGAAATAGCATTAGCTTTAAAAAGTACTGATTTTGAGCTTGCGAAAACTTTATCTAAAAAATTAGAAGAACTAATTAATTGGAGGAATGCTCATGAACATGAAGAAGATTAG
PROTEIN sequence
Length: 588
MIKVENLSYSFPQKNLYNKISFTLEDGQHCAFIGTSGSGKSTLINIIMDPEKYMFDGKLEIDPNCRIGYVSQFSQLDKPKETTVFEYISEKFIKLQNEITSICAEMETSSDIDTLLEKYQQAQDAFDAINGDEFESNINKKLNLADLSNHKGLMISELSGGEFKLVQVIKEMLNRPDLIIMDEPDVFLDFENINSLKNLINSHKETILVITHNRYLLNHCFNKILHLENMELQEFDGTYIDYNFSLLQAKIELQELAAADDEEIKRNEILINKLRFLATEVADASKGRALKARVKIQQRLMERRIKTPFVDIKQPNISLATDNKIEETIALKVNDYSVSFDEILLENVNFEIKSTDKVALIGPNGTGKTTLLKDIYKNDHDSIEINGDVKVAYLSQNQGEILNERNTILEEFADVGFETYQEIKSYLSNYCFNEKLVNQKIGSLSGGEKNILQLANVSASNASMLLLDEPTSHLDTYSQIALEKAIENYNGAILMISHDYNFIVNCMDYVLIIEDKTIRKMSMRKFRQMIYAKHFDKDYLEIEQKKKSVETEIALALKSTDFELAKTLSKKLEELINWRNAHEHEED*