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SCNpilot_BF_INOC_scaffold_3090_4

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(4039..4983)

Top 3 Functional Annotations

Value Algorithm Source
tktB; Transketolase subunit B (EC:2.2.1.1) similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 315.0
  • Bit_score: 441
  • Evalue 1.90e-121
Transketolase C-terminal subunit n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KZY7_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 315.0
  • Bit_score: 462
  • Evalue 3.70e-127
Transketolase C-terminal subunit {ECO:0000313|EMBL:CDE82004.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 315.0
  • Bit_score: 462
  • Evalue 5.20e-127

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Taxonomy

Ruminococcus sp. CAG:353 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 945
ATGGCTGATAGCATCAAAAAAGCGACCCGTGACGGTTACGGTGAAGGTCTGGTTGAACTGGGCAAAATGTACGACGATCTCTATGTTCTGGATGCTGACCTGGCTGCGGCAACCAAAACAGGAATGTTTAAGAAAGCGTTTCCCGATAGATTTATTGACTGCGGCATCGCAGAGCAGAATATGATGAGCATTGCGGCAGGCATTGTAGCAACCGGTAAAAAAGTATTTGCCAGCTCTTTTGCTATGTTTGCTGCCGGCAGAGCCTTTGAACAAGTCAGAAATGCCATCGGCTACCCGCACCTGAACGTGAAAATCGGTGCTACCCATGCCGGGATGTCCGTGGGTGAAGACGGCGCTTCCCATCAATGCAACGAGGATATCGCTCTCATGCGCTCCATTCCGGGCATGACCATCATCAACCCTGCTGATGCTGTGGAAGCAAAAGCGGCAGTGATCGCGGCGGTGAGCATTGACGGCCCTGTTTATCTGCGTTTTGGCCGGCTTGCTGTACCGGTGTTCAATGATGAGAGCTACACCTTTACTATGGGCAAAGGCATTCGCTTAACAGAAGGCAAGGACGTAACCATCGTTGCCACAGGCTTGATGGTCAATGAAGCGCTGATTGCCGCCGAACAGCTGAAAAATGAAGGCATCCGCGCCAGAGTAATCAATATTCATACCATCAAACCGCTGGATGAAGAAATCATCCTCAATGCCGCCAAAGAAACAGGCGCCATCGTAACGGCGGAAGAGCATTCTGTCATCGGCGGTCTCGGCGGAGCAGTTTGCGAATTATTATCCGGCACGGTTCCCACACCGGTGATTCGATTGGGCGCCAACGATACCTATGGTATGTCCGGTCCGGCCTTGGAGCTGTTGCAGTACTACGGTCTGACCTCAGCGAATATAATAGAAAAGGTAAAGACTGTTATTAAAATGAAATAA
PROTEIN sequence
Length: 315
MADSIKKATRDGYGEGLVELGKMYDDLYVLDADLAAATKTGMFKKAFPDRFIDCGIAEQNMMSIAAGIVATGKKVFASSFAMFAAGRAFEQVRNAIGYPHLNVKIGATHAGMSVGEDGASHQCNEDIALMRSIPGMTIINPADAVEAKAAVIAAVSIDGPVYLRFGRLAVPVFNDESYTFTMGKGIRLTEGKDVTIVATGLMVNEALIAAEQLKNEGIRARVINIHTIKPLDEEIILNAAKETGAIVTAEEHSVIGGLGGAVCELLSGTVPTPVIRLGANDTYGMSGPALELLQYYGLTSANIIEKVKTVIKMK*