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SCNpilot_BF_INOC_scaffold_3090_7

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(6653..7003)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 116.0
  • Bit_score: 177
  • Evalue 9.50e-42
Pseudouridine synthase n=1 Tax=Clostridium leptum CAG:27 RepID=R6N1B0_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 116.0
  • Bit_score: 177
  • Evalue 6.80e-42
pseudouridine synthase, RluA family protein similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 116.0
  • Bit_score: 166
  • Evalue 3.40e-39

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Taxonomy

Clostridium leptum CAG:27 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 351
AATGCACCCATCGGTCGGCACCCGGTCAAACGAAAACAAATGGCAGTGACAGAGAGAAATTCCAAACCAGCAGTGACCCATTATGAAGTGATTCAACGATATCAAGGATACACTCACATGCGTTTTCGCCTGGAAACGGGAAGGACCCATCAAATACGTGTTCATATGGCTTATCTGGGTCATCCGATTTTGGGCGACACGGTTTATGGAAGCAAAAAGAACACAAAAGGCTTGCAAGGGCAGTGCCTGCATGCCAAAAAAATCGGGTTTGTTCATCCAAACGGTCAGTATATGGAGTTTACATCGCCTCTGCCCGAATATTTTTGTGATGTATTAAAAAAACTATTGTAG
PROTEIN sequence
Length: 117
NAPIGRHPVKRKQMAVTERNSKPAVTHYEVIQRYQGYTHMRFRLETGRTHQIRVHMAYLGHPILGDTVYGSKKNTKGLQGQCLHAKKIGFVHPNGQYMEFTSPLPEYFCDVLKKLL*