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SCNpilot_BF_INOC_scaffold_3001_1

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 1..387

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 119.0
  • Bit_score: 137
  • Evalue 1.60e-29
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:678 RepID=R5L511_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 119.0
  • Bit_score: 137
  • Evalue 1.10e-29
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 117.0
  • Bit_score: 134
  • Evalue 1.60e-29

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Taxonomy

Clostridium sp. CAG:678 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 387
CACGGCGAATTGCACGGCAGTGGAACGATTGATCTGCCCATCAAACGAAAACCGGGTCTGAGCACCATGCGTCTGGTGGAAGAGGGCGGCGAGCGGGCGGTTACCCATTGGGAAGCGATAGAAGCCAAAGACGGGTACACACTGCTTTCCGTCAGGCTGGAAACCGGCAGAACCCATCAGATCAGGGTGCATTTCAGCCACATCGGCTATCCGTTGGCAGGGGATACCATGTATGGTCAGTCAAATGATTTGTTAAACCGACAAGCCCTTCATTGCGCCAATGTTTCTTTCCTCCATCCGGTTGGAATGAAAAAAGTCATAGTCCGGTCCGATCTTCCCGAGGATATGCGGCTTTTCATAACCGCCCATGGGTTTCGAGTATTTTAA
PROTEIN sequence
Length: 129
HGELHGSGTIDLPIKRKPGLSTMRLVEEGGERAVTHWEAIEAKDGYTLLSVRLETGRTHQIRVHFSHIGYPLAGDTMYGQSNDLLNRQALHCANVSFLHPVGMKKVIVRSDLPEDMRLFITAHGFRVF*