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SCNpilot_BF_INOC_scaffold_3318_7

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 4741..5457

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 238.0
  • Bit_score: 235
  • Evalue 6.00e-59
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:352 RepID=R6QY85_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 238.0
  • Bit_score: 235
  • Evalue 4.30e-59
pseudouridine synthase Rsu similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 236.0
  • Bit_score: 215
  • Evalue 1.30e-53

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Taxonomy

Clostridium sp. CAG:352 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 717
ATGGCATCTGAAAGACTAGACAAAATCATCGCTAATTACACTAGCATCACAAGAACACAGGCACGCAAACTGATTGTGGGCGGAAAAGTGACAGTGGACGGCGTTGTGATGAAAAAACCCGAAGCAAAAACGGATCCGGAATGCGCTGTCATAAAAACAGAGGATACCACAATCAATGCAAAACGTCACCTTTATATCATGATGAATAAACCGGCGGGCGTTATTTCTGCTTCAAGAGACAATAACGCCACGACGGTGATTGATTTGCTGCCGGAACATTTACAACGAAAAAACCTTTTCCCAGCCGGCAGGCTGGACAAGGATACGGAAGGTCTGCTTATCATTACCGATGACGGCGAATTTGCCCATCGGCTCCTTTCCCCAAAGTCCAAAGTGAACAAAGTTTATATTGCCCGAGTAGACAATACCCTTACGGAAAATGAGATAAAACTGTTTGCGGACGGTGTACAGCTAAAGGATGGCACAAAATGTCTTCCTGCGAAAATGACACTTCTTTCAGACACGGTTGCCGAGGTGCAAATTTACGAGGGAAAGTATCACCAGATCAAGAGGATGTTTGCTGCAGTCGGTTTCCAAGTGTTGTCGTTACAACGAATTCGCATCGGTCAGCTGTCTTTGCCTGATAATTTGTCTAAATCACAGGTAAGAGAACTGAAAATCGAAGAAATTGAGCTATTGTGCGAAAACGATAGGTAA
PROTEIN sequence
Length: 239
MASERLDKIIANYTSITRTQARKLIVGGKVTVDGVVMKKPEAKTDPECAVIKTEDTTINAKRHLYIMMNKPAGVISASRDNNATTVIDLLPEHLQRKNLFPAGRLDKDTEGLLIITDDGEFAHRLLSPKSKVNKVYIARVDNTLTENEIKLFADGVQLKDGTKCLPAKMTLLSDTVAEVQIYEGKYHQIKRMFAAVGFQVLSLQRIRIGQLSLPDNLSKSQVRELKIEEIELLCENDR*