ggKbase home page

SCNpilot_BF_INOC_scaffold_3318_9

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 6160..6759

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L183_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 199.0
  • Bit_score: 277
  • Evalue 1.10e-71
ABC transporter related protein {ECO:0000313|EMBL:CDE82395.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="R similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 198.0
  • Bit_score: 277
  • Evalue 1.50e-71
ABC transporter-like protein similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 198.0
  • Bit_score: 270
  • Evalue 4.80e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus sp. CAG:353 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 600
TTGAGACTGGGCACTACCTTCATCTATGTTACCCATGACCAGGTGGAAGCTATGACCATGGCTGACAGAATCGTTGTTATGAAGGATGGTTTCATTCAACAAGTTGATACACCTCAGCACTTATACGAAACCCCGATCAACATGTTCGTGGCGGGCTTCATGGGTTCTCCACAAATGAACTTCATTGAAGGAAAGATCATCAAAATAGGCGGCGAATTCTACGTTGAATTCGGTTCTGAAGACACCAAACACCGTGTGGGTGTGAAATATACCATCAAGCTTCCGGAAAGCAAAAATGTTAAAGGTGCTTTGGAAGAGTATGTTGACAAGGAAATTGTGATAGGCATCCGTCCGGAGCACATCCACGACGAGCCTGAAATTCTTGAAAAAATGCCGGAGGGTGTTGTTGAAGCCAATGTTGAAGTAACGGAGCTTATGGGTGCCGAGACATATCTGTATCTCACCTGTGAAGGTCACACCTTAACCGCTCGTGTTGCTCCAACCACCACCGCCAAAACAAATGATACCATCAAAATTGCAATCGAACCGGCAAAAATTCATCTATTTGATAAAGAAACAGAAAAAACCATCACGAACTAA
PROTEIN sequence
Length: 200
LRLGTTFIYVTHDQVEAMTMADRIVVMKDGFIQQVDTPQHLYETPINMFVAGFMGSPQMNFIEGKIIKIGGEFYVEFGSEDTKHRVGVKYTIKLPESKNVKGALEEYVDKEIVIGIRPEHIHDEPEILEKMPEGVVEANVEVTELMGAETYLYLTCEGHTLTARVAPTTTAKTNDTIKIAIEPAKIHLFDKETEKTITN*