ggKbase home page

SCNpilot_BF_INOC_scaffold_3407_5

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(4688..5719)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococca similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 343.0
  • Bit_score: 475
  • Evalue 6.50e-131
CRISPR-associated endonuclease Cas1 n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T9R3_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 343.0
  • Bit_score: 477
  • Evalue 1.60e-131
CRISPR-associated protein Cas1 similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 343.0
  • Bit_score: 473
  • Evalue 3.80e-131

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] papyrosolvens → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1032
GTGAGAAAACTACTCAATACCTTATACATCACAAGCCCCGACAGTTATTTGTCCCTTGACGGTGAAAACATTGTGGTTCAAAAAGAGGAAAAAGAGGCAGTACGTATTCCTCTTCACAACCTTGAAGGGATTGTGGCATTCGGGTATACCGGTGCGAGCCCGGCGTTGATGGGTGCCTGTGCCAAACGAAATGTTCCGATCCTGTTCATGACACAAAACGGAAGGTTTCTGGCAAGAGTCATTGGTGAGACAAGAGGGAATATCATACTTCGCAAAACGCAATACCGGGTTTCCGACAGTGAATTTTCCGCCATGGATATTGCAAAATGTATGATACTCGGTAAGATCTGTAACAGTAAGGCTGTTGTTGACCGTGCACTCAGAGACCATTCCTTACGGATAGACTGTGATGCACTCAAAAGGGTTTCTGCCAGCCTTGCCGGCTCAGTGGCGCAAGCCAAGGACTGCATGACACTGGATGAGCTAAGAGGAGTGGAGGGTGAGGCGGCCAGACAATATTTCGGCATATTCAATCATTTGATTCTTCAACAAAAGGATACTTTTTCATTTTCTACACGAGTGAAGCGCCCCCCGACCGACAATGTAAATGCATTGATGTCTTTTTTATATACATTGTTGGCTAACGATTGTGCGGCGGCATTGGAAACCGTCGGTGTTGACCCATATGCGGGGTTTATGCATCGGGACAGACCCGGGAGAATGTCTCTTGCCCTTGATTTGATGGAAGAGCTTCGTGCTGCTGTGGCTGACCGGATGGTGTTAACCTTAATCAACCGCAGGGAAATTAACGGAAAAGGCTTTGTAAAAAAAGAAAACGGAGCGGTTATCATGGATGATGAAACAAAAAAACTGGTTCTGAACGCATGGCAGACAAAAAAGAAGGAAGAACTGGTGCATCCGTTTTTAAATGAAAAAATCAGTTGGGGATTGGTACCGTATGCTCAAGCGATGCTTTTGGCAAGGCATCTCAGAGATGACATGGATGCGTATCCACCGTTTTTTTGGAAGTAG
PROTEIN sequence
Length: 344
VRKLLNTLYITSPDSYLSLDGENIVVQKEEKEAVRIPLHNLEGIVAFGYTGASPALMGACAKRNVPILFMTQNGRFLARVIGETRGNIILRKTQYRVSDSEFSAMDIAKCMILGKICNSKAVVDRALRDHSLRIDCDALKRVSASLAGSVAQAKDCMTLDELRGVEGEAARQYFGIFNHLILQQKDTFSFSTRVKRPPTDNVNALMSFLYTLLANDCAAALETVGVDPYAGFMHRDRPGRMSLALDLMEELRAAVADRMVLTLINRREINGKGFVKKENGAVIMDDETKKLVLNAWQTKKKEELVHPFLNEKISWGLVPYAQAMLLARHLRDDMDAYPPFFWK*