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SCNpilot_BF_INOC_scaffold_3713_6

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(4200..4946)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KL85_CLOPH similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 251.0
  • Bit_score: 193
  • Evalue 3.30e-46
transcriptional regulatory protein similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 251.0
  • Bit_score: 193
  • Evalue 9.40e-47
Transcriptional regulatory protein {ECO:0000313|EMBL:CDI49981.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 1212 similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 251.0
  • Bit_score: 193
  • Evalue 4.70e-46

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Taxonomy

Clostridium tetani → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 747
ATGTGTAAAGTTATCATATGCGATGATGAGCTGACAATAAGAAACGGCATGAAAAGTCTGATTGAAGCAGCAGGCTCAAAATTTGAAGTATCCGGTCTGGCGGCAAACGGGTTTGAGGCATGCAGGCTTATAACCGAGATAAAACCGGCAATAGTACTGATGGATATTAATATGCCCGGGCTGAACGGTTTGGAGGTAATAAGAGAAATGTCGGCGGTATCGCCCCTTACAAAATATATTATAATCTCGGGTTATGATGAGTTTCATTATGCACAAAAAGCAATTCAGCTTAAAGCGCATGATTATCTGCTAAAACCCATCGATAAAAACAACCTGTTTACCGTCATGGAAAGTGCGTATAATGAATATTTAAAGGACAAAAAGTCTTTTGCCGAGATATGGGATACAGAAGGATTGGGGCCTGCTGAGGAAGCGATAAATTATATTTATAAAAACTACAGTAACAGTGATCTGTCTCTTAAAAGCATGTCTTCCGAGCTTCATATAAGTGAGTCCTATCTTACAAGAAGCATCAAGAAGAAAGCAGGCATGAGTTTTTCGGAATTTCTTACAAAGGTCAGGATAGAGTCGGCAATTTCTCTCATTCTTTTATATTCATCACTTACAAGCCTGGAAGTATCGGAAAAAGTCGGATATAAAAGCCAGCACTATTTTTGCAAGGTATTTAAGGAATATACCGGAATGACACCTACAGCATATAAAAAAGCTTGTATTGACAGATGCTGA
PROTEIN sequence
Length: 249
MCKVIICDDELTIRNGMKSLIEAAGSKFEVSGLAANGFEACRLITEIKPAIVLMDINMPGLNGLEVIREMSAVSPLTKYIIISGYDEFHYAQKAIQLKAHDYLLKPIDKNNLFTVMESAYNEYLKDKKSFAEIWDTEGLGPAEEAINYIYKNYSNSDLSLKSMSSELHISESYLTRSIKKKAGMSFSEFLTKVRIESAISLILLYSSLTSLEVSEKVGYKSQHYFCKVFKEYTGMTPTAYKKACIDRC*