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SCNpilot_BF_INOC_scaffold_4116_3

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(1087..2367)

Top 3 Functional Annotations

Value Algorithm Source
capsular polysaccharide biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 30.3
  • Coverage: 402.0
  • Bit_score: 178
  • Evalue 2.00e-41
Polysaccharide biosynthesis protein id=4907039 bin=GWC2_Planctomycete_KSU_39_26 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes similarity UNIREF
DB: UNIREF100
  • Identity: 28.7
  • Coverage: 415.0
  • Bit_score: 164
  • Evalue 2.80e-37
capsular polysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 28.9
  • Coverage: 425.0
  • Bit_score: 163
  • Evalue 1.80e-37

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Taxonomy

RLO_Nitrospinae_45_22 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 1281
TTGAACTATGTGCAATTTATGAAAAATACAGCACAAGAATTTGAAAAAAGCAGTTTTCTCCTGTTTGCGTTCAGCATGGTTGTGAATATATGTAATTACATATATCAAATTGTTATGGGCCATCTCCTCACAGTATCGAACTATGGAACGCTGAATACTTTATTATCTATAACTATTATTGCTGCAGTGCCCGCGAGTGGAATGCTGATCATTGGAGGGAAGTACATTGCTGATTTTTCTGTAAAAAATGATATGACTGCCATTTCCAATTTGACAAAATGGCTTCTCAGAATCGGATTGATGATGGGTGGCTTGCTCGCGCTGATTGGGCTGATTTTTTCAAAAACCATTTCGGCTCGTTTAAATATTGTACTTAGTAATCTTGTTGTTGCGGCGATAGCTGTGTCTGCGATAAGCTATCTGATACCTGCTCTACAAGGGATACTGTTGGGTAAAAAACGATTTTCCTCCTTCAGCATCATGAACATTATTGTAGCGGCAGGCAAACTTATACTTGGCACCATACTTGTTATCCTTGGATGTGGTTTATACGGTAATATTTTTGGCTTACTGGCTGGGACGGTATTCGCGATTCTATTCGGACTTTATAGTATTAGGGACCTCTTTCAACCTCGGTCAGAGGACAAAAAACTGTCTATAGAGCTTTCAACAAAGAGCTATTTTTCTGCTGCGTTTGGCATTCAGATCATTACAGCACTGCTTACTAACGGCGATATTTTATTGATAAAGGCTTTTGTGAAAGACACCGAATATATTGGCGTATATTCCTCTGGAATGGTGATTGGTAAAATTGCGCTCTATGTTTCGTCAGCAGTTGTAACTGCTCTGCTTCCTATTGTCGCAGAGAGAAGTGCATTAAGGCAAGATACCAGAAAATTGTTCGCCAAAGCGATGTTATATGGGGGTGGAGCAGCATTTATTTGTGCTGCTGGCATTGTAACATTTGGTAATAGTATCATTACAATATTGTTCGGTTCGCGGTATTCCGGGGCAATTGGCATGTTATTTCCAATCAGTTGCTTTGTTATTCCACTAGCCTGCCTTACGATCCAAATTAACTATCTTGCAGCTATAGGAAAAACTAAAGTTCTTGTTACGACATTAAGCATTTGTTTGGCGTTGATTATTATACTAATTCGGCTGTATCATGATTCAATTGAACAAATACTGTTTGTCATGGGCAGCGTGCTGTTACTGGAATATCTGATTAATCTACCCAGCATTTTAAACAAAAAGTTGCTGGGAAATTATCTGTATTGA
PROTEIN sequence
Length: 427
LNYVQFMKNTAQEFEKSSFLLFAFSMVVNICNYIYQIVMGHLLTVSNYGTLNTLLSITIIAAVPASGMLIIGGKYIADFSVKNDMTAISNLTKWLLRIGLMMGGLLALIGLIFSKTISARLNIVLSNLVVAAIAVSAISYLIPALQGILLGKKRFSSFSIMNIIVAAGKLILGTILVILGCGLYGNIFGLLAGTVFAILFGLYSIRDLFQPRSEDKKLSIELSTKSYFSAAFGIQIITALLTNGDILLIKAFVKDTEYIGVYSSGMVIGKIALYVSSAVVTALLPIVAERSALRQDTRKLFAKAMLYGGGAAFICAAGIVTFGNSIITILFGSRYSGAIGMLFPISCFVIPLACLTIQINYLAAIGKTKVLVTTLSICLALIIILIRLYHDSIEQILFVMGSVLLLEYLINLPSILNKKLLGNYLY*