ggKbase home page

SCNpilot_BF_INOC_scaffold_4361_8

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(4126..5964)

Top 3 Functional Annotations

Value Algorithm Source
Radical SAM domain protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MMM5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 607.0
  • Bit_score: 804
  • Evalue 5.90e-230
Radical SAM domain protein {ECO:0000313|EMBL:CCY92743.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacter similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 607.0
  • Bit_score: 804
  • Evalue 8.30e-230
radical SAM protein similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 610.0
  • Bit_score: 771
  • Evalue 2.10e-220

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Eubacterium sp. CAG:180 → Eubacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1839
ATGACAGATTTAGAATTCTCAAAACTGGTGGAAAACGTTCAAAAACCCGGCAGATATGCGGGCGGCGAGCTGAACAGCGTGCTCAAAGACAAACAGCAGATTGCTGTGAGGTTTGCCTTCTGTTTTCCCGATATTTACGAAATCGGTATGTCCCATCTGGGAATGAAAATTTTATACAGCCTATTAAACGAGCTCGACTATTGCTGGTGCGAGCGCGTTTTTGCGCCATTTACCGATATGGAAGCATCCTTGCGGGAGAATAACCGGGCACTGTTTGCCATCGAAAGCCGGGACGATTTATCTGAATTTGATATCATCGGGTTCACATTACAGTATGAGCTTTCTTATACCAATATTTTAAATATGCTTGCGTTGGGCAATGTGCTGCTTCTGTCCGCTGACCGGGCCGGACTCCATCAGCTTGTCATTGCCGGCGGTCCCTGTGCCTGTAATCCCGAACCGTTGTGCGACTTTGTGGATCTTTTTGTTTTGGGCGAAGGGGAAGAGGTCACAGCAGAGCTTGTGTCTCTTTACCGCCAGCATAAGCTAAACGCAAGCACGAAAGATGAATTTTTGGCCGCCGCCGCAGCAATCGAGGGGGTTTATGTTCCTTCCTTGTACCTTGTAAAGTATCGGGAGGATTTCTCCGTCGAAAGTGTAGCTCCCAGGGATTCTGCGCCGGCAAAGGTGAGAAAGAGGATCATAAAAAATCTTGACAAGGTTTTTTATCCCGATCGGTTTGTTGTGCCTTATATGGAAATTGTCCACGACAGGGTGATCCAGGAGATTTTTCGTGGCTGTATCCGTGGCTGCCGGTTCTGTCAGGCAGGCATGATTTACCGCCCTGTCAGAGAAAAAAACCTTGACATCGTCTCCCAACAAGCGAAATGCTTGTGCGATACCACGGGGTATGACGAGGTTTCCCTGTCGTCCTTAAGTACCAGTGATTATTCTGCTCTTGAGCCGCTGGTGGACAAGCTTTTGTCTTGGTCGGAACAGGATAAGGTCAGCATTTCCTTGCCCTCTTTGCGCATTGACAGCTTTTCTCCCCAACTGCTGGACAAAATTTCTAAGGTGCGAAAATCCGGGTTGACCTTTGCACCGGAAGCGGGCACCCAGAGAATGCGTAATGTGATCAACAAAAACATTAGCGAAGAGGAGATCATCAATACCTGTAAAACCGCTTTTGCAGGTGGCTATATCAATATCAAGCTGTATTTTATGATGGGACTGCCTTATGAAACCATGGAGGATATTGAAGGGATCATCGATTTGTCCCAGCGGGTGGTTGATTTATACTATCAAAATCCCGACAAGCCAAAGGGCAAAAGCGTTCAGGTATCCATCAGCGTCTCCACCTTCGTACCGAAGCCTTTTACCCCCTTTCAATGGGCTGCCTTTGACAGCGCTGAAAGCATCAAGGCAAAACAGCAGCATCTATTGTCCTATACCAAGTCGAAAAAGATTAAAATCAGCTTCAGTGACAAGGAAACCTCCTTTTTGGAGGCAGTTCTGGCGCGGGGCGACAGACGGTTGGGGGCTGTGCTCCTAAAAGCGTTTTCACTTGGCTGCAAAATGGACGGCTGGGATGAGTTTTTGGATTTTGAAAAATGGATGGAGGCTTTTGCCGCCTGCGGTGTTGACCCGCTGTTTTATCTGCGAAAGCGGGAATATGACGAGAGATTGCCCTGGGATCATCTGGACTATTATGTGACTAAGGGGTTTTTACAAAGAGAAGACGAAAAAGCCGCTATGGAAGCTGTTACGGAAAACTGCCGTCAAAGATGCTCCGGCTGCGGCGCCGATCAGGGCGGAGGGTGTAGTTTTGAGAAACGTTAG
PROTEIN sequence
Length: 613
MTDLEFSKLVENVQKPGRYAGGELNSVLKDKQQIAVRFAFCFPDIYEIGMSHLGMKILYSLLNELDYCWCERVFAPFTDMEASLRENNRALFAIESRDDLSEFDIIGFTLQYELSYTNILNMLALGNVLLLSADRAGLHQLVIAGGPCACNPEPLCDFVDLFVLGEGEEVTAELVSLYRQHKLNASTKDEFLAAAAAIEGVYVPSLYLVKYREDFSVESVAPRDSAPAKVRKRIIKNLDKVFYPDRFVVPYMEIVHDRVIQEIFRGCIRGCRFCQAGMIYRPVREKNLDIVSQQAKCLCDTTGYDEVSLSSLSTSDYSALEPLVDKLLSWSEQDKVSISLPSLRIDSFSPQLLDKISKVRKSGLTFAPEAGTQRMRNVINKNISEEEIINTCKTAFAGGYINIKLYFMMGLPYETMEDIEGIIDLSQRVVDLYYQNPDKPKGKSVQVSISVSTFVPKPFTPFQWAAFDSAESIKAKQQHLLSYTKSKKIKISFSDKETSFLEAVLARGDRRLGAVLLKAFSLGCKMDGWDEFLDFEKWMEAFAACGVDPLFYLRKREYDERLPWDHLDYYVTKGFLQREDEKAAMEAVTENCRQRCSGCGADQGGGCSFEKR*