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SCNpilot_BF_INOC_scaffold_4398_2

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(860..1324)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KWH9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 40.0
  • Coverage: 150.0
  • Bit_score: 106
  • Evalue 1.90e-20
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERJ96637.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus calli similarity UNIPROT
DB: UniProtKB
  • Identity: 42.5
  • Coverage: 134.0
  • Bit_score: 106
  • Evalue 2.70e-20
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 134.0
  • Bit_score: 104
  • Evalue 3.60e-20

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Taxonomy

Ruminococcus callidus → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 465
GTGCAGGGCGGCAATCGACGGCGGCGCCATCNNNNNNNNNTCGTCGCAATCGATGAAGCGACCGGAATTCCGGAGGTTTTGCGACTGGAAGTGCAGACGGTTTATGATTATGCACAGATGGTGCAGGAGACAAAATCACTGCAAAACTGTTCCGCGGTCGTGCGCGCCTGCGTAGACTATATCACGGTGCATTCACACGGTTTGATCAAACTCGAAGAGCTTGCCGAGGGTACCGGATACACAAAAGAATATCTGGCAAAGCTGTTTAAAAAAGAGATGGGGATCTCGATCAGTGATTATATCCTGAAGGTGCGCGTCGATGAGGCAAAAGAACTGCTGGTTACCGGGCGCTCGTGCGGCGAGGTGACACATCTGCTCGGGTTTTCATCGCAGAGTTATTTCATTCGTCAATTCAAAAAGACCACCGGAATGACTCCGAAGCTGTTTGTAAATGTCAACTCCTGA
PROTEIN sequence
Length: 155
VQGGNRRRRHXXXXVAIDEATGIPEVLRLEVQTVYDYAQMVQETKSLQNCSAVVRACVDYITVHSHGLIKLEELAEGTGYTKEYLAKLFKKEMGISISDYILKVRVDEAKELLVTGRSCGEVTHLLGFSSQSYFIRQFKKTTGMTPKLFVNVNS*