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SCNpilot_BF_INOC_scaffold_4675_6

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 10961..11761

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1262798 species="Bacteria; Firm similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 265.0
  • Bit_score: 260
  • Evalue 2.50e-66
Shikimate 5-dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 266.0
  • Bit_score: 230
  • Evalue 7.40e-58
Shikimate dehydrogenase n=1 Tax=Clostridium sp. CAG:352 RepID=R6S2D0_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 265.0
  • Bit_score: 260
  • Evalue 1.80e-66

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Taxonomy

Clostridium sp. CAG:352 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 801
ATGTCGCCCTTTATTCACAAACGATTGTTTACACTTTCGGGAATTGACGAAAGCTATCGCAATATCGAAATTCCGCCGGAGCAATTGGACACCCAATTCCATTCCCTTACAATGCTTCGGGGATTCAACGTTACTATTCCCCACAAGACGGCGATTATTCCGTTTCTCACAGAGCTGGAATCCAAAGCTGCTTTGTTTGAATCCGTCAATACCGTGGTCTGCGGCGACACGCTGAAGGGATACAACACAGACACGGAAGGATTTTTGCGCTCACTCTCCCATTGTTCCGTTCCCTTGTCCGGCCGTGTGTTAATCGCCGGAGCCGGAGGAACTGCCCGCATGTTTGCCTTTGAAGCCGCTTTGCACGGCTGTGACACCACCATTTGCTGCCGGGATCAAAGCATTGAAAAAGCAAAAAAGCTAAAAACAGATGTACAGTCAAAACTCGGAGGCGCAAGCATCTCGGTGTTGCCCGAATCAGACATAGAGGGTACCTATGATCTTTTATTGAACAGCACTCCTTTGGGGATGTACCCGAACTACATCGGCAGGCTTCCCTTGAAGGAAACCATCCTATCCCGTTGTGCCGCAGTATTCGACGCGGTCTATAACCCGGAGGATACCGCACTGTTACAGCTTGCCCGAGCGAACGGGGCAAGGGCCGTAGGCGGAATGCGCATGCTGGTACTGCAGGCGGTGGCGGCACACGAAATCTGGAACCAAACCGTTTTTTCACAAGACGACATCGAAACGCTGATTGTCGATACCAATGTTGAACTGCAAAGGGTGTTTTCAAAATGA
PROTEIN sequence
Length: 267
MSPFIHKRLFTLSGIDESYRNIEIPPEQLDTQFHSLTMLRGFNVTIPHKTAIIPFLTELESKAALFESVNTVVCGDTLKGYNTDTEGFLRSLSHCSVPLSGRVLIAGAGGTARMFAFEAALHGCDTTICCRDQSIEKAKKLKTDVQSKLGGASISVLPESDIEGTYDLLLNSTPLGMYPNYIGRLPLKETILSRCAAVFDAVYNPEDTALLQLARANGARAVGGMRMLVLQAVAAHEIWNQTVFSQDDIETLIVDTNVELQRVFSK*