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SCNpilot_BF_INOC_scaffold_4814_2

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(649..2682)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TN79_ALKMQ similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 678.0
  • Bit_score: 654
  • Evalue 1.40e-184
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 678.0
  • Bit_score: 654
  • Evalue 4.00e-185
  • rbh
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) {ECO:0000313|EMBL:ABR47647.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus. similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 678.0
  • Bit_score: 654
  • Evalue 2.00e-184

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Taxonomy

Alkaliphilus metalliredigens → Alkaliphilus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2034
ATGGTCTCAAATAACAAGATTTATAAATCAGATATAAGCAAGCTGCTTCTATCCTCCCCATATGCTGTCGCCATTCTCGACAGGGAGCAGAAAATAGTTGATATCAATGACAATTTTAAAAAAATGTTTCAATACAGTCTGACTGAAGCCAAGGGAAAATTTATCAGCAGCTTGGTATCTTTTGAACATCACAGGAAACAAGTCGACAAGAACGTTGAAAAAATATACAAGGGTCACGGGCTTAAGCTTGAGGGGGAGAGGAAGCGCAAGGACGGAAGTGCAGTATATGTTGAGATAATGGGACATCCCGTAATCCACCGCCAGATGGTAGTCGGAGTTTATATTTTATACATTGATGTATCTGAGAAGAAAAATAATGAACGGCAGCTTCATCTGTTCAAAAAAATTCTGGAAAAAAATACTGAAGGAGTTTTTATAACCGACAAAAACGGTAACGTGGAATGGATAAACAATGCTTTCACTGATATCACCGGTTACACTTCCGAAGATTTGATTATTCCGAAAATCAATATCTTACAATCCGGTATTTACAGTGATGAATTTAACGATATACGTAATCATGTTGCTTATTATGAATCATGGAAGGGAGAAGTCTGGAATACAAATAAAAACGGTTATACCTATTCCGCATGGATGTCAATCAGCAGCATTAAAAACGAACAGGAAGAAATAACTCATTATGTGGGTATTATGAAGGATCTCTCTGAAAAAAAGAAAGTCGATAAAAGGATGATTGAACTGCAGCAGAAAGATGCTCTGACAGGCCTGTATAACAGGCATCATTTCCTGGAAGCTATGGAAAGGCATATTNNNNNNNNNNCAATAGATATTGACAGCTTCAAGGATATCAACGATTCTTTGGGTCACAGCGTCGGAGACAGATTGCTCATTGCTGTATCCGACAGAATGGCAGCTTCATGCACGCAGTGTATGATATCAAGGGTTGATGGTGATGAATTTGCTCTTCTAAGCACCTTAGTAGATAAAAATGAGCTGCTGTATTTTGCTGAAATGATGCTCTATCAGTTAGAAATACCATATATAGTTTCAAATACAGAAATATATTTGAAATTCAATGTTGGAATCTGTTTATTTCCGGAGGATGGTAAAAGTTCTGAAAATTTAATGCGTTTTGCAAATGCCGCAATGAATCATTCTAAAAACGAGTTAAGCAGCAGGATATGCTTCTATTCAAATAATATTTCAAAGGAAACTGAAGAAAAATTTTATTTGGCAAATTACTTGTTTGGCGCAATTGCCAATAGTGAATTGACGGTATGCTTTCAACCCATTTTTGAAATAAATGAATTTAAAATCGTCGGAGCAGAAGCATTGCTGAGGTGGCGCAGCCCCATACTGGGAAATATACCGCCTGATAGATTTATATCTATAGCAGAAAAAACCGGTCAAATAATTGTAATCGGCGAATGGGTCATAAAAGAGGTATGCAGTCAGATGCACATCTGGAAAGACAAAGGATACCGACTTTTTCCCATATCAATAAATCTTTCCGTAAAGCAGTTAGAGCAACCTAATTTTTCGAAAACTGCCATGGATATAATCAAGAGCGAAAATATAAATCCGGGACTTATTGAATTTGAAATAACTGAAAGTGTGTCATCAGGAGACATAACACAAATTGTCAGTAATATAAAGGAATTGAAACGAAACGGAATAAAAATATCTATGGACGATTTCGGAACAGGTTTCTCTTCACTCGGACAATTGGACATCTTTGAACTGGACAAGCTTAAGATTGATAAAATATTTATAGACGACTTAGTAACCGGAGCCAGAAGGCAAAATCTTGTCAAATCGATTATCGCCATGGCTAAAAGCCTTAATCTTGTAACAGTTGCAGAAGGAATTGAAACATGCGAGCAGCTTTGTCAGCTTAAGGGTCTGGGCTGCCAGCTGGGTCAGGGATTCATATTCAGCAAGCCGCTGACAGCGGCGGATACCGAAAGCTTATTATATCAGGAAAAAAAAATTAAGTTTACGGCGTGTAAATAA
PROTEIN sequence
Length: 678
MVSNNKIYKSDISKLLLSSPYAVAILDREQKIVDINDNFKKMFQYSLTEAKGKFISSLVSFEHHRKQVDKNVEKIYKGHGLKLEGERKRKDGSAVYVEIMGHPVIHRQMVVGVYILYIDVSEKKNNERQLHLFKKILEKNTEGVFITDKNGNVEWINNAFTDITGYTSEDLIIPKINILQSGIYSDEFNDIRNHVAYYESWKGEVWNTNKNGYTYSAWMSISSIKNEQEEITHYVGIMKDLSEKKKVDKRMIELQQKDALTGLYNRHHFLEAMERHIXXXXIDIDSFKDINDSLGHSVGDRLLIAVSDRMAASCTQCMISRVDGDEFALLSTLVDKNELLYFAEMMLYQLEIPYIVSNTEIYLKFNVGICLFPEDGKSSENLMRFANAAMNHSKNELSSRICFYSNNISKETEEKFYLANYLFGAIANSELTVCFQPIFEINEFKIVGAEALLRWRSPILGNIPPDRFISIAEKTGQIIVIGEWVIKEVCSQMHIWKDKGYRLFPISINLSVKQLEQPNFSKTAMDIIKSENINPGLIEFEITESVSSGDITQIVSNIKELKRNGIKISMDDFGTGFSSLGQLDIFELDKLKIDKIFIDDLVTGARRQNLVKSIIAMAKSLNLVTVAEGIETCEQLCQLKGLGCQLGQGFIFSKPLTAADTESLLYQEKKIKFTACK*