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SCNpilot_BF_INOC_scaffold_5489_6

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(5218..7797)

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQB6_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 29.9
  • Coverage: 445.0
  • Bit_score: 181
  • Evalue 4.50e-42
Uncharacterized protein {ECO:0000313|EMBL:EHL73864.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FA similarity UNIPROT
DB: UniProtKB
  • Identity: 29.9
  • Coverage: 445.0
  • Bit_score: 181
  • Evalue 6.30e-42
PDZ domain protein similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 180.0
  • Bit_score: 112
  • Evalue 5.60e-22

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Taxonomy

Subdoligranulum sp. 4_3_54A2FAA → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2580
ATGAAAAAATGGTCAAATCTTATACTTGCGTTTGTCTTTCTTTCTTCTGTGATCTCAAATAGCGCGCAAGCCGCAAATGCAGTCCCAACAGAGGTAATGGAAGCAAAAGATTCGGTTGTGCGAATAATAACTGAATATACTTCAGCATTTTCAAGTGGATCGGGTTTTGTAATACAGAGTGACAATGAAAAAACTCTAATTGCGACCAATTATCATGTGGTAGAAGGAAACGCACTGAATATATCGGTTTTATTGGGGAATAATGAGACTATAGCAGCTCGTATAGTTGCTTATTCTGATCAAAAAGACCTGTGCATATTAGAACTAGCATATACTATATCCATGAAAGAGCTGATGCTTAGTAAAAATGCAGTCTCTCAAGGCGATCCTGTATATGCTGTTGGTTTTCCGAGTGCAGCTGATAATTTTTCTGATTCGATAGCACAGTCAAGCCAAGAGGCTACAATTACAGATGGCATTGTTAGTGCAATGCGACAAGTAACAATTACACAATATGGTTCACTAGTTAATATTCTTCAAATTAATGCCGATATAAATCCCGGCAATTCGGGAGGACCTTTGTTTAATAACAAAGGTGCAGTCATTGGAATAAACACATACGGAATTCTCGATTCACAAGGTATAAATGGTGCAATTGACATCGACGAACTGATTACATTATTAAACGACAATGACATTTATTATGCATCAGTTCAGAAGGAATTAAGAGATTCTTTAATAGCAATTATAGTAATATTGTCTATCATGGGAGTTTCCGTTCTTCTTTTCGTATTAAAAAAGAATGGTTCGTTTGGTAACTTTAAAAACCTATTGAGAAAACATAAAAAGGGAAATACTCTACGTGTTTATATGGAGAAATATCCCAATGGAATAAAAATAAATGAAGCCGTTTCTTTGCTTATGCCAATTGCCCTTCAAATTAAAAATTTTCACAATAATGGAAAACTGCATCTTCAAATATCTCCAGACCTAATAATAATAAATAACGGTACTTCAAATTTAACCGCTCCAACATCTTTTGAAAACAATATGTATAGCAGTGGGTTTGCTTCCCCTGAGGTTTATCGGCACAAAGGAATATCTGCACCTTCAGATATTTATTCGTTCTGTGCAATTTTACTTTATGTAGTTAGTGGTAAAATTCCTGAAAACGCGCTCAATCTTGAAGACTACACATCAATTTTTATACCAGAATCTATAAAAAATGATGATTTTGTATCTATCATAAAAAAAGGGTTGGCAATGAAATCTGATGATCGATATTTGGATATTTCCGAGCTGATTAAACGACTATTGCCTTTTTCTACAAAGCAAAACGTTATGAAAAGCAATGATAGTGGTGAAGATATTCAAGATTCTCCGATTGTTAATGATAAGATAGAAGCTTGCCTTGATAATAATCTAGGCAATACTTCAGGTTTAGCTTTAGATGCAAGTAAGAACCTGCCATCAAAGCGAAAAAAAACTGTAATTGTTACACTTGCCTGTATTTCCAGTTTTATAGTGTTAATTTGCGGATTATATTGCGCTACATATAAAGTAGCCACAGGCAAAGCTACGGAAGGCGAATTTGAAATTGCCAATAAGTATCTTATCCTTCCTTTTATCACCAGTCTCCACGATCCATATCTTATAGAATATGTAAATGCTGGTTTGTTATTATATGATCGACAGTTTAGCAAAGCAGAAGAAGCCTTTGCTTCTTTGGATCAATATTTAAATTCTGAGCAATGGGTTAAAGAATCAAAATACAGGCACGCGGCACAGTTAACTGATACAGATTTATTTGATGAAGCGATTGGAATATATAAGGAGCTTCAAGGAATAAACTATAAAGACTCAGGGGATATGTTACTAAATACACAATATCGTAAAGGTGTGTATACGCTTTACGAGTTGCAAGATTATGAAAATGCAAGCGAAATCTTCACAGCACTTAGAAACAAGAAATATTCAAAAGCGGATGAAATGTACCTCGAAACTTACTATGTTTGGGGCAATAGTCTCGCTAATGAAGAAGACTACTTAGGCGCATTCGATAAGTTATCAATATGTTCGGGATATAACGACTCAAAAGAATTACTCAACGCATTAAAAACTACAATATATGAGATTGGTGTCAATGATTATCGCAACGGTGATTACATCAACGCGGGGGCATATTTTACCAAAGTTTCTAAATACTCCAATGTAAATAATTATTTGATTTTAATTAAAATGCATCAGAAGACTTCCCATACTGAGTTTGATATATCAACGCTTACCTCGCTTATTGGATTTGAGGATGCAAGTTCGTTGATTTTTAAAAGTAATGGCGAGCTTTTCTTTAATGGGACATTTAGTTGCAGTTCTGGATATGTAAAATTATATAAAGATAACAAAGGCGATTGGCGAGGACAATGGACATTGCCGGGTATACCAAGCGGAACATGGCATTTTGACAATGGAACATTTTATACTAGTAATAGAGCGAGGTTTGATATTTACGCAACTTCAGCTAACAGCATAGTTGTATATGTGATCAGTTCTGGTAAAACTTATACTTTAACAAGAGGATAA
PROTEIN sequence
Length: 860
MKKWSNLILAFVFLSSVISNSAQAANAVPTEVMEAKDSVVRIITEYTSAFSSGSGFVIQSDNEKTLIATNYHVVEGNALNISVLLGNNETIAARIVAYSDQKDLCILELAYTISMKELMLSKNAVSQGDPVYAVGFPSAADNFSDSIAQSSQEATITDGIVSAMRQVTITQYGSLVNILQINADINPGNSGGPLFNNKGAVIGINTYGILDSQGINGAIDIDELITLLNDNDIYYASVQKELRDSLIAIIVILSIMGVSVLLFVLKKNGSFGNFKNLLRKHKKGNTLRVYMEKYPNGIKINEAVSLLMPIALQIKNFHNNGKLHLQISPDLIIINNGTSNLTAPTSFENNMYSSGFASPEVYRHKGISAPSDIYSFCAILLYVVSGKIPENALNLEDYTSIFIPESIKNDDFVSIIKKGLAMKSDDRYLDISELIKRLLPFSTKQNVMKSNDSGEDIQDSPIVNDKIEACLDNNLGNTSGLALDASKNLPSKRKKTVIVTLACISSFIVLICGLYCATYKVATGKATEGEFEIANKYLILPFITSLHDPYLIEYVNAGLLLYDRQFSKAEEAFASLDQYLNSEQWVKESKYRHAAQLTDTDLFDEAIGIYKELQGINYKDSGDMLLNTQYRKGVYTLYELQDYENASEIFTALRNKKYSKADEMYLETYYVWGNSLANEEDYLGAFDKLSICSGYNDSKELLNALKTTIYEIGVNDYRNGDYINAGAYFTKVSKYSNVNNYLILIKMHQKTSHTEFDISTLTSLIGFEDASSLIFKSNGELFFNGTFSCSSGYVKLYKDNKGDWRGQWTLPGIPSGTWHFDNGTFYTSNRARFDIYATSANSIVVYVISSGKTYTLTRG*