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SCNpilot_BF_INOC_scaffold_5670_2

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(377..862)

Top 3 Functional Annotations

Value Algorithm Source
nth; endonuclease III (EC:4.2.99.18) similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 136.0
  • Bit_score: 176
  • Evalue 5.90e-42
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 136.0
  • Bit_score: 176
  • Evalue 2.20e-41
Endonuclease III n=1 Tax=Clostridium intestinale URNW RepID=U2NKF9_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 136.0
  • Bit_score: 178
  • Evalue 5.50e-42

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Taxonomy

Clostridium aceticum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 486
ATGACGAAGGCAGAAAAAGTATATGAATTATTAAAAGTGGATTATCCGGATGCAAAGTGCGGTCTGGATTACGGGACACCCTTTCAGCTGCTTGTTTCAACCATGCTGAGCGCACAGGCAACGGACAAAAGTGTAAATATAGTTACAAAGGGAATTTACAGTGAATACCCGGACCTTGAAAGCTTTCTGACACTGACGCAGGAAGAAATAGAGCAGAAAATAAAGAAAATAGGATTGTATAAGAATAAATCAAAAAACATATATCAAATGTGCCATGAATTGAAGGATAAATATAACGGAGAGATACCCAGGCGAATGGAGGATTTGCTGTCATTGCCGGGAGTTGGCAGAAAAACAGCTTCGGTGGTACTTATTGAAGCGTTCGGAATTCCTGCTTTTCCTGTTTCGGCGTATCCTGTGGTCGATCCTGGTCCTCGTGGGCCTGTCGATCGTCATCTTCGCCATTGCCCGCGTGGTTCCGGGTGA
PROTEIN sequence
Length: 162
MTKAEKVYELLKVDYPDAKCGLDYGTPFQLLVSTMLSAQATDKSVNIVTKGIYSEYPDLESFLTLTQEEIEQKIKKIGLYKNKSKNIYQMCHELKDKYNGEIPRRMEDLLSLPGVGRKTASVVLIEAFGIPAFPVSAYPVVDPGPRGPVDRHLRHCPRGSG*