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SCNpilot_BF_INOC_scaffold_5600_2

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 1406..1657

Top 3 Functional Annotations

Value Algorithm Source
Dockerin type 1 n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T8L7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 66.0
  • Bit_score: 64
  • Evalue 7.80e-08
Dockerin type 1 {ECO:0000313|EMBL:EGD48849.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782 similarity UNIPROT
DB: UniProtKB
  • Identity: 47.0
  • Coverage: 66.0
  • Bit_score: 64
  • Evalue 1.10e-07
leucine-rich repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 66.0
  • Bit_score: 61
  • Evalue 1.10e-07

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Taxonomy

[Clostridium] papyrosolvens → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 252
ATGGATATTTCCGCACTCAGCACGCTTTCAAAACTGACTTATCTCGACCTTTCAGGGAACGACATTACGGATATTTCACAGATTTCAAAGTTGAATCAGCTGGCAACACTCAATGTATCGCACACCGGCGTAACGGATCTGGCGCCCGCGCTTTCAATGACCGGGCTAAAGAGGCTCTATATCAGCTACGATATGGTTTCATACGCCAAGTCGATTGTATCAGGTGGCTTTGATCTGATTGTTACCGAGTAA
PROTEIN sequence
Length: 84
MDISALSTLSKLTYLDLSGNDITDISQISKLNQLATLNVSHTGVTDLAPALSMTGLKRLYISYDMVSYAKSIVSGGFDLIVTE*