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SCNpilot_BF_INOC_scaffold_5738_11

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 6667..8358

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein E n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U2Z3_ETHHY similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 560.0
  • Bit_score: 635
  • Evalue 5.70e-179
tapB; Type IV pilus assembly protein TapB similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 560.0
  • Bit_score: 640
  • Evalue 5.00e-181
Type IV pilus assembly protein TapB {ECO:0000313|EMBL:CDZ23360.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cel similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 560.0
  • Bit_score: 640
  • Evalue 2.50e-180

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Taxonomy

[Clostridium] cellulosi → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1692
GTGAGTGCTTTGAATATCAACAACGTTCCATTGGGCGAATTGTTGGTCAACACCAATATTATCACCCAGGAGCAACTGAACACAGCATTACAAAGGCACGAGGAAAATCCCGAAGAAAAGCTGGGTGATATTTTAATCGCCCAGGGCTATATTACAGAGGAACAGCTGATGAAAGCGTTGGAATACCGTTTTCGGATCCCTTTTTATGAGCTGTTTACCATAGAAATCCCTCCGGAGGTTGCATCGCTGATCACCGCCGAGATTGCGAAGGAACACAATCTTGTACCGGTTTCGAAGGACGGGAAAAATCTTTATGTTGCCATTTCAGACCCTATGAACTACCGTGCGCTGGATGAGGTGAAGTTTTACACCAAGCTGCAGGTCAAGCCGGTGCTAGCCACCAAGGCCGACATCAAAAACACCATCATCAAACTTTACGAAGCAACCCAGACGGATGAGGCAGTTCAGGACATCAACAAGGAATATACCATTGAGGACGTTGCCGAGCTAAGCGAAAGTATCAACGAAAATGTGGACAATGCGCCGATTGTCAGGCTGGTGAACCTCATCATCAATCAGGCCATCAATGCCCGCGCCAGCGACATCCACATCGAACCCATGGAAAATCTGGTCCGCATCCGCTTTCGTATCGACGGTGTCTTGTATGAACAGCTGACCATTACAAAATCAGCCCATGCCGCCGTTACCACACGTCTGAAAATTATGAGCGATCTGGACATTGCCGAGAAACGAATCCCCCAGGACGGAAGAGCACAGGTTGTCTTTGGCGGACAGGCAATCGATTTGCGTCTGTCGGTTTTGCCCACGGTAAACGGAGAAAAAATAACCATCCGGATTTTGGGCGGAAAGGGAAGCCTTTTATCCAGAGAAAAACTGGGCTTTACCAAAGCGAATTCCGATATGTTTGATTCGATGATCAAAAACCCCAACGGAATCATTCTTGTGTCGGGTCCCACCGGAAGCGGTAAATCCACTACACTATACACCATTCTCAACGAGCTGAACCGACCCTCTGAAAACATCATTACGGTTGAGGATCCGGTAGAATTCCGAATGGCGGGCATCAATCAGGTTCAAATCAACACAAAAGCAGGACTCACCTTTGCTGCCGGTCTTCGCTCCATTCTGCGTCAGGATCCGGATATTATCATGCTGGGCGAAATCAGAGATGCGGAAACGGCAGAAATTGCGGTCAGAGCATCCATCACAGGACATCTGGTGCTGTCCACCATCCATACCAACGATGCGGCCTCCACCGTATCAAGACTGGTCGATATGGGCATTGAGCCGTTTTTGGTATCGGCCTCCCTCGTGGGCGTGGTGGCACAGCGGCTGGTCAGAAGAATTTGCACCAAATGCAAAACCTCATATACCCCGCCGAAAAGCGAACTGAATTTTTTGCATTTAGAAGAAGATATTACATTATACAAAGGAACAGGCTGTACCAGCTGCGGTAACACCGGCTACAAGGGACGTATCGGCATTCACGAAATCCTGCTGATGAACCGTGAGATGCGGGAACTGGTAGATGCCAGAGCGACGGCAGAACAGCTCCGTAAAGAGGCGATCAAAAACGGGACAACTTCTCTGCGGGACAATTGTGCAGAGCTTGTTCTGGGCGGAATCACCACAATCGAGGAACTGATCAAGGTAACCTACAGCATCAGCTAA
PROTEIN sequence
Length: 564
VSALNINNVPLGELLVNTNIITQEQLNTALQRHEENPEEKLGDILIAQGYITEEQLMKALEYRFRIPFYELFTIEIPPEVASLITAEIAKEHNLVPVSKDGKNLYVAISDPMNYRALDEVKFYTKLQVKPVLATKADIKNTIIKLYEATQTDEAVQDINKEYTIEDVAELSESINENVDNAPIVRLVNLIINQAINARASDIHIEPMENLVRIRFRIDGVLYEQLTITKSAHAAVTTRLKIMSDLDIAEKRIPQDGRAQVVFGGQAIDLRLSVLPTVNGEKITIRILGGKGSLLSREKLGFTKANSDMFDSMIKNPNGIILVSGPTGSGKSTTLYTILNELNRPSENIITVEDPVEFRMAGINQVQINTKAGLTFAAGLRSILRQDPDIIMLGEIRDAETAEIAVRASITGHLVLSTIHTNDAASTVSRLVDMGIEPFLVSASLVGVVAQRLVRRICTKCKTSYTPPKSELNFLHLEEDITLYKGTGCTSCGNTGYKGRIGIHEILLMNREMRELVDARATAEQLRKEAIKNGTTSLRDNCAELVLGGITTIEELIKVTYSIS*