ggKbase home page

SCNpilot_BF_INOC_scaffold_5318_6

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 5224..8322

Top 3 Functional Annotations

Value Algorithm Source
S-layer domain-containing protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MBB6_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 29.5
  • Coverage: 877.0
  • Bit_score: 338
  • Evalue 2.70e-89
S-layer domain-containing protein {ECO:0000313|EMBL:CDB95905.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.5
  • Coverage: 877.0
  • Bit_score: 338
  • Evalue 3.70e-89
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 23.5
  • Coverage: 489.0
  • Bit_score: 95
  • Evalue 8.50e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Firmicutes bacterium CAG:41 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3099
GTGTATATAGTTCAATGCAAATCGTTAAAAAAGAAGGTTTTAGCAGCAATCATAACATTTTTGATGCTATCCTCATTATTTTATAGTTCTTTTGCGGAGGAGTTAACCGTTTCTGATGACGGGTCAATATTAGTTTCTGCAAATAAGAAAATGGAAGCTTCAAGCTCAAATGGTTCTTCCCAGCCAAAATTAGCAATTGACGGAAGTGAAGAAACCATGTGGGTTGCCCAAGGGGGGAGCAAACCGCAATGGCTGAAAATAGACCTTGGAAAGGTATATCCGTTGGTTAAAGTCAAACAAATTTTTGCTGCAAATGATAAGTGGCACTATAAACTGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTGGCAGATGAGACAAATGCAACTTCTTCAACCTCCTCTTTTTCGGAAGCTGTAAGCGGAAAATACCGTTATGTAAGATTAACCATTACAGGTCCCACAGCCGGAAACTGGGCAAGCAGCAGGGAATTTGAAATCTATACATTAGACGAGGACGCAAAGAAAAGGCCTGCTTTTCGTACATATACGGACTCTCCGTTTTTGGACACCAAAGGTACAAAATACGATGAAGCGTGCACAGTTTTGGCAATTACAGATATTGCGGCCGGGGATAGCGACAGCAATTTTAAACCTGAACGGCCGGTTATGCGTGATGAATTTGTAACGATGGTTTGTAAAATGATGAACTGGGATTCTATTATGGCGGATGGTGTACAATCCTCTGTTTATCATGATGTTCCGGCAAATCACGGGGCTGCGGCTCAGATTAAAATGGCGGCAGACGCGGGGATTATTCAGGGGGATAGTGATGGTAACTTCAAGCCCGGGGATTCTATAAAATTAGGGCATGCGGTGAAAATTGTCATTGATGCCCTTAAATATAATGTATATGCTGTGGAGGCAGGCGGATATCCAGGCGGTTATCAGTCAGCCGCAGTAAAGCTTGGTATTTTGAAGGGGATTAACCTATCCTTTGAGGAGAATTTGACCAGAGGGGATATGGCGCTGTTATTATACAATGCCTTGAAATGTGATCTTTTGGATCAAACTGTTTTCAGTGAAACATCACAGTATACGATCGTGCGCGGAAAAACACTGTTGAGTGATGTCCATAAAATACAAAAGCAGAAAGGTCAGATTACAAAAACGCAATATTCAGGCTTACACGGCACAGTCAATAAAGATGATATTGAACAATATGAAATAGAAATTGACGGCTATGTGTATCAGCTGGGTAACAACAGTCTTAACTTTCATGACTGGTTGGGGTATAATGTTGTTTATTTTGTAAAATATGATGAACCGGCTGATAACGGAGATATTGAGAAAAATATTCTTTCCATAACGGTTGACGAGGCTAATACTAATATCATATCTGTTGATGCAGATGATATTGACAGTTATAGCACCGATCATAAAAACTTCAGTTATTGGAAGGATTCGGATCAGTCTAAAACAGGAAAAGCAGTCATTGATGAAAAGGCAAGTATTATTTATAACGGGGTTTTTGATGGTTTTGCAGTTGATTTGGATAAGAGAGACCTGGCGCCTGTGTCCGGCAATGTGAAATTAGTTGATATCAATAATGATAAAAAATATGATGTAGTTGTCATTCATAATTATTCACATTATTTAGTTGATGGTATTAATGCAACTAAAAAATCAATTGTAGTGAAAAATAAGGAATGCAGCGATATTGAGCTTGATGATGAAAATGAAGATTATGGATTTATCTTACAAAATGAAGGAAAGCCAATCGCTTTAAAGGCTGTTTCAGAGTATGATGTAATTTCTGTTCTAATGAGCAGAAATCAAACCGGTATGCCTCTGAAAACAGTAATTGTATCTGAAAATAGAATTCAGGAAGGAAAGCTGACCGAAAAATATGATAACATTCTGTCGATAGACGGAAAAGAATATAAAATAGATAAAAGCCGGTTATCGCTGGCAGACAGATTGCAGCTTGGTGAGGTTGCAGATTTTTATCTGACCGGTGACAATAAAATTGTATTTGCAGATTCATCCGCATTAAAAGGTCTTTTGGGCTACGGATATCTGATTCGGGCAGGTAAACATAAAAATGACCTTTCAGGCTCTGCGCAATTTAAAATTGCAACCTTAGAAGGGAAGCTTTTAACATTACTGACAGCCGAAAAATTAAATGTGACTGAATATCAAACAGGTGAAATGAAAAATAATACGGTAAATGCACTGGATTTTGTCAACACGCATCTGATTGATTTGACTTCAGTTACCAATACAAAAATGCAGCTTATAAAATATTCCGTCAATGCTGACGGGAAAATAAATAAAATCAGTTTGGCGAAGGACGGATACGATTCTCAGTATTTTTCTTTGGATTACAAAAATTCTGCAGCCAGCTATTACTGGTTTGTAAAAGAGTTTGATTTTAAATATATATTTGGTACAAAAACTAAGATGCTGATTATTCCGGATTCAAACCTGGCAGAGGATTTTGATAACAATGATAACTATTTTACCAAACAAAGCTTTAACAGTACCGATAAATACAATATTGAGGTTTATGACTCAGATGAAGACCGGGTTCCGGCTCTTATCGTGTTTAGGGGCTTAAATCGTAATTATTATGCTGACTCGGCTGTATATATTGTAGACCGTATCACTTCTACAGTAAATGCAGAGGGCCAAGTTGTTTCTAAATTATATGTATATGCCAAAGGCGGGAAAAAAGAGATTCTGGCAAAAAATAATTCAGTACTTAACAATATCAAGCAGGGAGATACGGTGTTAATTATTACCAACCCGAATAATCAGCTGGAAAATATTTCGAAGGTAACGCCTGCCAACCTTGGTGAGTTCAGGGTAAATGAACAGTTTAACAAATTTTTTGATGTTCTGGAAAGAAGAAAAGGATACATTTACGATGGAACCAGATGGTATAACATATCAGCTGCAAACATTTATAAATATGACGGTTTAAACGGGAAAATTGATAATTTGACATATGAAGAGTTAACAGAAGGCGATAAGGTGCTTGTTCATGTTGAAAATTATGTTGTAACAGATGTATTTGTAAGCAGTAACCATTAG
PROTEIN sequence
Length: 1033
VYIVQCKSLKKKVLAAIITFLMLSSLFYSSFAEELTVSDDGSILVSANKKMEASSSNGSSQPKLAIDGSEETMWVAQGGSKPQWLKIDLGKVYPLVKVKQIFAANDKWHYKLEXXXXXXXXXXLADETNATSSTSSFSEAVSGKYRYVRLTITGPTAGNWASSREFEIYTLDEDAKKRPAFRTYTDSPFLDTKGTKYDEACTVLAITDIAAGDSDSNFKPERPVMRDEFVTMVCKMMNWDSIMADGVQSSVYHDVPANHGAAAQIKMAADAGIIQGDSDGNFKPGDSIKLGHAVKIVIDALKYNVYAVEAGGYPGGYQSAAVKLGILKGINLSFEENLTRGDMALLLYNALKCDLLDQTVFSETSQYTIVRGKTLLSDVHKIQKQKGQITKTQYSGLHGTVNKDDIEQYEIEIDGYVYQLGNNSLNFHDWLGYNVVYFVKYDEPADNGDIEKNILSITVDEANTNIISVDADDIDSYSTDHKNFSYWKDSDQSKTGKAVIDEKASIIYNGVFDGFAVDLDKRDLAPVSGNVKLVDINNDKKYDVVVIHNYSHYLVDGINATKKSIVVKNKECSDIELDDENEDYGFILQNEGKPIALKAVSEYDVISVLMSRNQTGMPLKTVIVSENRIQEGKLTEKYDNILSIDGKEYKIDKSRLSLADRLQLGEVADFYLTGDNKIVFADSSALKGLLGYGYLIRAGKHKNDLSGSAQFKIATLEGKLLTLLTAEKLNVTEYQTGEMKNNTVNALDFVNTHLIDLTSVTNTKMQLIKYSVNADGKINKISLAKDGYDSQYFSLDYKNSAASYYWFVKEFDFKYIFGTKTKMLIIPDSNLAEDFDNNDNYFTKQSFNSTDKYNIEVYDSDEDRVPALIVFRGLNRNYYADSAVYIVDRITSTVNAEGQVVSKLYVYAKGGKKEILAKNNSVLNNIKQGDTVLIITNPNNQLENISKVTPANLGEFRVNEQFNKFFDVLERRKGYIYDGTRWYNISAANIYKYDGLNGKIDNLTYEELTEGDKVLVHVENYVVTDVFVSSNH*