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SCNpilot_BF_INOC_scaffold_5258_4

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 3567..3866

Top 3 Functional Annotations

Value Algorithm Source
Ribosome-recycling factor n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U8S2_ETHHY similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 99.0
  • Bit_score: 144
  • Evalue 7.10e-32
frr; Ribosome-recycling factor similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 99.0
  • Bit_score: 145
  • Evalue 8.90e-33
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=29343 species="Bacteria; F similarity UNIPROT
DB: UniProtKB
  • Identity: 67.7
  • Coverage: 99.0
  • Bit_score: 145
  • Evalue 4.40e-32

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Taxonomy

[Clostridium] cellulosi → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 300
TTGGGCATCAACCCTTCCAACGACGGAAGAACAATCCGTCTCAATTTTCCGGCGCTGACAGAAGAACGCCGTCGTGAATTGGTCAAGGACATTCATAAATATGCCGAAGAGGCAAAGGTAGCTGTTCGCTCCATCCGTCGTGATACCATTGACAAATATAAGGTGCTGAAAAAAGACGGCGGTATGACGGAGGATGACTTGAAGGATGCCGAAAAAGAAATTCAGGATCTGACCGATAAGTTCTGTAAGGAAGTTGACACGCTGTCTGCAAAAAAAGAAAAAGAGATCATGGATATATAA
PROTEIN sequence
Length: 100
LGINPSNDGRTIRLNFPALTEERRRELVKDIHKYAEEAKVAVRSIRRDTIDKYKVLKKDGGMTEDDLKDAEKEIQDLTDKFCKEVDTLSAKKEKEIMDI*