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SCNpilot_BF_INOC_scaffold_6158_3

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(2558..2779)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FGX8_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 55.0
  • Bit_score: 74
  • Evalue 3.90e-11
Two component transcriptional regulator, AraC family protein {ECO:0000313|EMBL:EMS70850.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.; similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 55.0
  • Bit_score: 74
  • Evalue 5.40e-11
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 55.0
  • Bit_score: 70
  • Evalue 2.10e-10

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Taxonomy

[Clostridium] termitidis → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 222
ATGGCTGATTTTACAATTAACAGCCAATGGATTACTATGTATAAAGTTATGATTATTGATGACGAAGCTATGATTAGAAAGGGATTGCAGACAGGTATTGACTGGGAAGCTTTTGGATGTAGTATCGTAGGTGTTGCAGAGGACGGAGTAAGTGGAGTTGAGTTGATTTCTGAGCTGGAACCGCATATTATTCTTACTGATNNNNNNNNNNNNNNNNGTTAA
PROTEIN sequence
Length: 74
MADFTINSQWITMYKVMIIDDEAMIRKGLQTGIDWEAFGCSIVGVAEDGVSGVELISELEPHIILTDXXXXXX*