ggKbase home page

SCNpilot_BF_INOC_scaffold_7059_7

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(5583..5939)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GPN2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 100.0
  • Bit_score: 116
  • Evalue 2.50e-23
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCY17679.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 100.0
  • Bit_score: 116
  • Evalue 3.40e-23
Helix-turn-helix. similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 101.0
  • Bit_score: 109
  • Evalue 6.50e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Eubacterium sp. CAG:786 → Eubacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 357
ATGCTGTATAATGGTATTGTAGGTGGTGATAAAATGAATACAGACTTAGCATATGAAGAAATGTTGCCAAAGAGATTAGCTGAGCTACGAACTAACAAAGGCGTATCTGCGAGAGATATGAGTTTATCAATCGGTCAAGGTCCGGCATACATCAACAATATCGAAAATGGAAATAGTCTTCCGTCAATGATGGGATTATTCTATATTTGCGATTATTTAAAAATTTCCCCCAAAGAGTTCTTTGATTTCGAAAACAAAGCACCTACCGAAACAGATGAATTGATAACTTTAATCAAGAAATTTGATAAAGAAACCATAGGCCTTTTAACAGATATTGCAAAGAAAATGAAGAAATGA
PROTEIN sequence
Length: 119
MLYNGIVGGDKMNTDLAYEEMLPKRLAELRTNKGVSARDMSLSIGQGPAYINNIENGNSLPSMMGLFYICDYLKISPKEFFDFENKAPTETDELITLIKKFDKETIGLLTDIAKKMKK*